PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000458.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 203aa    MW: 22857.9 Da    PI: 6.924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000458.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-184696155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           + y+GVr +  +g+Wv+e+r+p   +k+kr++lg++ ta++Aa+a++ a ++++g
  Cse_sc000458.1_g060.1 46 PVYRGVRKRD-SGKWVCEVREP---NKKKRVWLGTYPTADMAARAHDVAVLAMRG 96
                           68*****999.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MTTFIQFNAG NIPTESCSTS DEDVHLASQN PKKRAGRKKF KETRHPVYRG VRKRDSGKWV  60
CEVREPNKKK RVWLGTYPTA DMAARAHDVA VLAMRGRSAC LNFADSLWRL PIPQSSNVKD  120
IQKAAVKAAE AFRSVNDDVT LAEESNEVKE NHVIYMDDDV VFGMQGFFAD MAEGMMLPPP  180
KSIGYDNCVD DVEFSVDMSL WSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15271RKRDSGKWVCEVREPNKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.17e-76ERF family protein