PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000455.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 162aa MW: 18472.5 Da PI: 4.7946

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000455.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.5	2.9e-13	25	83	3	61
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +l++ +r+ +NRe+ArrsR RK++ ++ L++ + +L++ N++ + +++ ++++ + ++ Cse_sc000455.1_g040.1 25 DLRKRKRMLSNRESARRSRMRKQKHLDDLTDQINQLKNNNSQIITTIKVTTQQSVRIEA 83 58999**************************************9999988877766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MDPSSGNSSG STQIQNSGSD EDLVDLRKRK RMLSNRESAR RSRMRKQKHL DDLTDQINQL 60 KNNNSQIITT IKVTTQQSVR IEAENSILNA QIVELSQRLE ALNEIISCMN NESVDHGISM 120 QYTNGTSGMF ESEQPDFFNN QWNMMYLNPQ AIMVSGCDVF EY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	27	48	RKRKRMLSNRESARRSRMRKQK
2	40	47	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	6e-34	bZIP family protein