PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000441.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 664aa MW: 72940.2 Da PI: 5.4771

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000441.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	165.8	5.4e-52	535	630	1	96
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylk 88 vreqdr++Pianv+rim++++P++akis+daketvqecvse+isfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+v l+ Cse_sc000441.1_g110.1 535 VREQDRLIPIANVIRIMRRIIPSHAKISDDAKETVQECVSEYISFVTGEANDRCQREQRKTITAEDILWAMSKLGFDDYIEPLTVNLH 622 59************************************************************************************ PP NF-YB 89 kyrelege 96 +yreleg Cse_sc000441.1_g110.1 623 RYRELEGG 630 ***985 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MGVTREKDKG GGTLEHEFGG ANNYSSLNKT TPEKAPGVVT PRVESLSMDT NSPSVSSLNR 60 TYDRTTLASN LDDMAGSKSF KTSMPKVALF DNPNVTREGD EQVNDGLKAP TFASKVGYTF 120 ATRKVNFLTL DTGKPLNEKA EVKIPLSSVL EANSKFDNTL FGYFIGKRVA FPVVDNYDLG 180 SIPVWVKLHD IPIAAFTEDG LSAMATKLGT PIMLDAYTSS MCLQSWGRFD YARALIDIKA 240 DRELKGTMVI AVPSWDGEEE VLHTVRVEYE WKPPRCGVCM VFGHDGTQCP KRVPVDLKHQ 300 AQKNDGFQMP QRKAFRGIEV GKGAKFNHSK HKKQVYQPVS KKSDATKKKI TEVASTSGTN 360 IATSNPFDAL NRVDTYEVDI PSVTIDLTKD GSSAKGGNGG TSTTPIVGKI EELEKLIIEG 420 KVTLVDDDGK PLKKVDLKEK AHDTATKPSN PSSKVGDVIV SDNDDEGVLE PDNPMAKFLA 480 STGGGHELED YYDDYADQVY DLPGQLDAFS DMYDIKLQGR GITSKSVTSD NECLVREQDR 540 LIPIANVIRI MRRIIPSHAK ISDDAKETVQ ECVSEYISFV TGEANDRCQR EQRKTITAED 600 ILWAMSKLGF DDYIEPLTVN LHRYRELEGG ERGSAKDADT KAYGIDVFQM GHHLFGPTII 660 GVAS

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MGVTREKDKG GGTLEHEFGG ANNYSSLNKT TPEKAPGVVT PRVESLSMDT NSPSVSSLNR  60
TYDRTTLASN LDDMAGSKSF KTSMPKVALF DNPNVTREGD EQVNDGLKAP TFASKVGYTF  120
ATRKVNFLTL DTGKPLNEKA EVKIPLSSVL EANSKFDNTL FGYFIGKRVA FPVVDNYDLG  180
SIPVWVKLHD IPIAAFTEDG LSAMATKLGT PIMLDAYTSS MCLQSWGRFD YARALIDIKA  240
DRELKGTMVI AVPSWDGEEE VLHTVRVEYE WKPPRCGVCM VFGHDGTQCP KRVPVDLKHQ  300
AQKNDGFQMP QRKAFRGIEV GKGAKFNHSK HKKQVYQPVS KKSDATKKKI TEVASTSGTN  360
IATSNPFDAL NRVDTYEVDI PSVTIDLTKD GSSAKGGNGG TSTTPIVGKI EELEKLIIEG  420
KVTLVDDDGK PLKKVDLKEK AHDTATKPSN PSSKVGDVIV SDNDDEGVLE PDNPMAKFLA  480
STGGGHELED YYDDYADQVY DLPGQLDAFS DMYDIKLQGR GITSKSVTSD NECLVREQDR  540
LIPIANVIRI MRRIIPSHAK ISDDAKETVQ ECVSEYISFV TGEANDRCQR EQRKTITAED  600
ILWAMSKLGF DDYIEPLTVN LHRYRELEGG ERGSAKDADT KAYGIDVFQM GHHLFGPTII  660
GVAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	2e-60	NF-YB family protein