PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000427.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 335aa    MW: 39439.2 Da    PI: 9.8373
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000427.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.13.8e-102098790
                   FAR1  7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                           A+ +GF ++k+++k++  ng++++ +++C+k+g  e + +     ++++++++ +C  +l+ k +  + +w +      HnHel+
  Cse_sc000427.1_g070.1 20 ASGLGFVIVKKRTKSE--NGQMMEINYMCTKSGIYEYHGSG----KQKTKTKKSDCPFRLVAKYRPtRYNWILRVKCDSHNHELV 98
                           7789**9999987666..999***************98877....899999**************9888898888889*****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MYFQAFRSHE EVTEWVQNIA SGLGFVIVKK RTKSENGQMM EINYMCTKSG IYEYHGSGKQ  60
KTKTKKSDCP FRLVAKYRPT RYNWILRVKC DSHNHELVAK YRPTRYNWIL RVKCDSHNHE  120
LLESLHGVPY AMRLKDDELS LVKELSEYSV PQRNILSTIK GRNPDNVSSV RTIYNALDKF  180
RRARVGDRTQ IQVLYSHLTD SGAEFPTAHK LLCRWHIEQN LLKFMRNRCG GIDEYDSIKR  240
RWDRLVKAPT SRLFEQQYER LQQRLVNHAR TEFQVQMTIG VDTSVGKMNE IMLLKTRIKT  300
LEMELELARN PEDHACQSGA RLHDLLNEMN NLHMS