PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000420.1_g150.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 702aa MW: 81286.5 Da PI: 7.8602

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000420.1_g150.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.4	4.6e-08	81	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 ++Y eYA+++ Fs+rks+ k++ ng it++ C+k g +++ k + a++k k+ + + ++++++ ++HnH Cse_sc000420.1_g150.1 81 NMYLEYAQKARFSIRKSTIKRK--NGDITHKYILCNKAGLPRKIVVK-------------DTLACVKFKRIHgTPAYRLYEFTENHNH 153 58*************98887..999*********9987665.............445778999988889*********** PP FAR1 88 ela 90 +l Cse_sc000420.1_g150.1 154 PLL 156 995 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MRLYETQHGT RSHDVIQLVN VEEAVIWDEH DQSDRSDFEG SESDDEVVPT PNGHKYWIPD 60 VPFEEKPTED DVFDSFDEAY NMYLEYAQKA RFSIRKSTIK RKNGDITHKY ILCNKAGLPR 120 KIVVKDTLAC VKFKRIHGTP AYRLYEFTEN HNHPLLDENY MDLSTAKRKL DFSDKLFIHR 180 ASLSNIGPTK AHRLRVAFMG GYDKVRGKPS DWKNFRRSLN KYIGPRDAQM LVDKMNDRKK 240 HVPNFTFEYH CVNDCVTFGV ALMNETSESY EWILTAFKQA HGKAPILVVT DQDAALRKAV 300 EAVLPESNHR LCMWHITQKL PGKICGELES DAEFKKMFHK LIWNVFIGLE EFEERWHALF 360 GMFNLTGNKW LSEMFEIRDR WIPGYFKDLP MCSLMKTTSR SESSNTFFRI YSHSGNMLVQ 420 FMLCFEAAME KQRYTQRVMD NRTFESTPVM FTNLPIERHA CQVYSRSIFR EVQKEILKGL 480 YSCSQINVNQ EDGAKVCFIR QKSKSTGTII NAQVVWNELD GTVMCTCNHF GRHGYLCRHV 540 FCVIRVNGID QIPHLYISKR WKKDVLPPHL QEKRHRYGPC IEETDNLAAD AHATLEYYAD 600 LPKENNKVNN EEIYQNLLGV TTPSEVIVKV PQGIRNKGCG TGGGRFIGPG EKAKTKSKTK 660 KKGRTCSICD EVGDNMRTCK QKKGKGIAVE DEDDDYEDYD NE

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MRLYETQHGT RSHDVIQLVN VEEAVIWDEH DQSDRSDFEG SESDDEVVPT PNGHKYWIPD  60
VPFEEKPTED DVFDSFDEAY NMYLEYAQKA RFSIRKSTIK RKNGDITHKY ILCNKAGLPR  120
KIVVKDTLAC VKFKRIHGTP AYRLYEFTEN HNHPLLDENY MDLSTAKRKL DFSDKLFIHR  180
ASLSNIGPTK AHRLRVAFMG GYDKVRGKPS DWKNFRRSLN KYIGPRDAQM LVDKMNDRKK  240
HVPNFTFEYH CVNDCVTFGV ALMNETSESY EWILTAFKQA HGKAPILVVT DQDAALRKAV  300
EAVLPESNHR LCMWHITQKL PGKICGELES DAEFKKMFHK LIWNVFIGLE EFEERWHALF  360
GMFNLTGNKW LSEMFEIRDR WIPGYFKDLP MCSLMKTTSR SESSNTFFRI YSHSGNMLVQ  420
FMLCFEAAME KQRYTQRVMD NRTFESTPVM FTNLPIERHA CQVYSRSIFR EVQKEILKGL  480
YSCSQINVNQ EDGAKVCFIR QKSKSTGTII NAQVVWNELD GTVMCTCNHF GRHGYLCRHV  540
FCVIRVNGID QIPHLYISKR WKKDVLPPHL QEKRHRYGPC IEETDNLAAD AHATLEYYAD  600
LPKENNKVNN EEIYQNLLGV TTPSEVIVKV PQGIRNKGCG TGGGRFIGPG EKAKTKSKTK  660
KKGRTCSICD EVGDNMRTCK QKKGKGIAVE DEDDDYEDYD NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-49	FAR1 family protein