PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000412.1_g090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | G2-like | ||||||||
Protein Properties | Length: 237aa MW: 26523 Da PI: 7.3036 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107 | 1e-33 | 13 | 67 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Cse_sc000412.1_g090.1 13 RQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRAMGVQGLTIYHVKSHLQKYRL 67 58****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 64 | 2.8e-20 | 15 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ Cse_sc000412.1_g090.1 15 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRAMGvQGLTIYHVKSHLQKYR 66 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MMIMDDNPSL ASRQRLRWTN ELHERFVDAV AQLGGPDRAT PKGVLRAMGV QGLTIYHVKS 60 HLQKYRLSKC LPDSSCEGKA FDQKESGAMI SSLDGSSGMQ ITEALKLQME VQKRLHEQLE 120 VQRQLQLRIE AQGKYLKKII EEQQRFGPGS GPESDNKTDH SPFIMDKEPH APSKSISVDE 180 PFSSRHEPST PDSGCHLVGS PLESSVKKRR LSSLDDDATH QILESSSFRP PYTIQLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-82 | G2-like family protein |