PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000388.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 208aa MW: 23133.5 Da PI: 7.9988 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.6 | 9.6e-05 | 40 | 62 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Cse_sc000388.1_g050.1 40 YTCTFCRREFRSAQALGGHMNVH 62 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MWNPNLVTAG GQEEDDSWEV KAFAEDTGNI MGTTWPPRSY TCTFCRREFR SAQALGGHMN 60 VHRRDRARLH QAQPNFKNPN LPSPSSSTLL INPTQELVAN GGLCLLYSLP NPNTIFNHSS 120 LGNEIGNHSS FLSITPHPST ENFMNFQASF GTRSFKSSLS SFSNTETSTS TNFQRNQKDS 180 LDNKRKKTDS TIEGIDLELR LGCNSRAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 1e-34 | C2H2 family protein |