PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000380.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 320aa    MW: 35880.8 Da    PI: 7.4267
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000380.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.43.4e-54151421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yLkkkve+ ++++  +i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+
  Cse_sc000380.1_g060.1  15 LPPGFRFHPTDEELVVHYLKKKVESVPIPA-AIIAEIDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGT 101
                            79****************************.88***************988899********************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+v+++ ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl
  Cse_sc000380.1_g060.1 102 DKPVMTAgGTHKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 142
                            ******977788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MESADSSTNS QHPHLPPGFR FHPTDEELVV HYLKKKVESV PIPAAIIAEI DLYKFDPWEL  60
PAKAAFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVMTAGG THKVGVKKAL  120
VFYGGKPPKG VKTNWIMHEY RLMDNKMISK PPGFEAAKNK GSLRLDDWVL CRIYRKSHTQ  180
RPVDGDISLG GGSDLVMNEM LAPPPIDLVM NEMLAPPPMF RPFIHQGIMK SPGGYSGYNT  240
MSDNHEHNNV LFDTMMNSNP NGSSMETQMT AKTEENDGSM GSLSLLSQMP QLHNQTMVVP  300
SGDQSVYRQP YQLPDMNWYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-101NAC family protein