PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000351.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 400aa    MW: 43998.6 Da    PI: 5.4486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000351.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00022953271754
                            HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             ++   L++l+ +      +K + a++L +A+eYIk L
  Cse_sc000351.1_g080.1 295 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKLL 327
                            55666677777776.....8****************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MAEEFQAEVS WWNSPRTNFN GSPFMSNYYA GGCWQNDFMS IKTRSTDESC GGYTATISPD  60
SAFQITDSGS GSSPSANTTW HQSLLVNGRN EESYNQQTLP EIILNNLPVS GQEISSNFAM  120
NQQETSNFMT NSGDCTENLG TTTYGYPSSS LQTLFESASP PTAAAPQQQA LYDFEANLNN  180
FNSVPSMPNG FSSIVKPKQQ VLGGLHLANK TPYWNASVLG LNDNRGGYIA STQPRFGSST  240
YEEKGSYPNM KSQNEEIRDL GSSVKKSSGE PTFKRPRLET PSPLPTFKVR KEKLGDRVTA  300
LQQLVSPFGK TDTASVLHEA IEYIKLLHDQ VNVLSTPYMK NGATMQRLQI HDKVKDNTEG  360
AKQDLRSRGL CLVPVASTFP VTTETAQDYW TSSFGSTTFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.14e-62bHLH family protein