PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000324.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 299aa MW: 33784.8 Da PI: 6.546

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000324.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.7e-16	22	64	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ +E l+vd+++ lG++ W+ Ia++++ gRt++++k++w+ Cse_sc000324.1_g060.1 22 RGSFSSQEASLIVDLHQILGNR-WAQIAKHLP-GRTDNEVKNFWN 64 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
LQRCGKSCRL RWLNYLHPDL KRGSFSSQEA SLIVDLHQIL GNRWAQIAKH LPGRTDNEVK 60 NFWNSSIKKK LLARSHLSSH QLITTCPNDK TTNIHVQFGG DHQCYDGLFD ASPIMISPYQ 120 PHIIHDQDHH VHEPPRATSQ PHVIDLDKCF NTDPTPDLPP LPQSFIVNSS SMFDNHFATM 180 EFLNSYDHSI LNPEDYDLIF GQSSDHNPSI IPFKLGDQTD NIDLTTNIIP QAINSHDLNP 240 STSSQTDYLE TFVPNFPSSS SSPSSSLVLP QFVVSKMQSV ERMSCGDQKI QLKLHLHTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	3e-42	MYB family protein