PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc000324.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 328aa MW: 36924.4 Da PI: 7.2233 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl Cse_sc000324.1_g040.1 17 RGLWSPEEDEKLINYITSHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 64 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.1 | 1.3e-15 | 70 | 112 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++ +E l+vd+++ lG++ W+ Ia++++ gRt++++k++w+ Cse_sc000324.1_g040.1 70 RGSFSSQEASLIVDLHRILGNR-WAQIAKHLP-GRTDNEVKNFWN 112 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 328 aa Download sequence |
MGHGGGHTCC NKQKVKRGLW SPEEDEKLIN YITSHGHGCW SSVPKLAGLQ RCGKSCRLRW 60 INYLRPDLKR GSFSSQEASL IVDLHRILGN RWAQIAKHLP GRTDNEVKNF WNSSIKKKLL 120 AHSHLSSHHL ITTFPNHKTT NIHVQLGGDH QYYDGVFDAS PIVISSYQPH IIHDQDRHVH 180 EPPRATIQPH VINLDKCFDV DPTPDLPPLP QSFIVNSSSM FDNQFATMEF LNSYDHSILK 240 PENYDFILGQ NSDHNPSIIP FKLGDQTNNI DLTTNIIPQA INAHDLNPST SSQTDYLETF 300 VPNFPSSSSS PSSSLVLPQF VVSKTNNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13890.2 | 2e-70 | MYB family protein |