PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000314.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ZF-HD
Protein Properties Length: 269aa    MW: 29755.5 Da    PI: 7.343
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000314.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.31.3e-3163117358
            ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                            + rY+eClkNhAa++Gg+ +DGCgEfmps g+egt +alkCaAC+CHRnFHR+e++
  Cse_sc000314.1_g040.1  63 APRYRECLKNHAANTGGNITDGCGEFMPS-GDEGTLEALKCAACNCHRNFHRKETT 117
                            569*************************9.999********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEMSDTDKEI RTQTSSAPYN NHHLIHECTS EPMDNHGSEP DRFDGYGASA TPISVGSRLL  60
RSAPRYRECL KNHAANTGGN ITDGCGEFMP SGDEGTLEAL KCAACNCHRN FHRKETTTVA  120
AVGPFLHLPP PLPSPSASFN HHPSWASSVI TPRGGPTYPP INAPPLKIAV GGSSFATESS  180
SEELHFAATP PYGMVKKRFR SKFTPEQKEK MVEFAERVGW RIPREDDVEV QRFCLEIGVK  240
RQVLKVWMHN NKAISVKKLQ VQDSNETID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.15e-58ZF-HD family protein