PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000309.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 291aa    MW: 32145.9 Da    PI: 8.4759
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000309.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.32.7e-11653347
                           SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47
                            W++eEd+ + +a++ + ++    +W+tIa+ ++ ++t  ++k ++q +
  Cse_sc000309.1_g020.1  6 VWSKEEDKAFENAIANHWTEdtkeQWDTIASLVP-TKTIPELKQHYQLL 53
                           7*********************************.***********965 PP
2Myb_DNA-binding38.33.1e-12129173347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT+eE+ l++ +  ++G+g+W++I+r     Rt+ q+ s+ qky
  Cse_sc000309.1_g020.1 129 PWTEEEHRLFLLGLDKFGKGDWRSISRNYVISRTPTQVASHAQKY 173
                            7*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MSSSKVWSKE EDKAFENAIA NHWTEDTKEQ WDTIASLVPT KTIPELKQHY QLLVEDVDDI  60
EGGIIPLPKY LGEESSSSST KDNHQGSNSN RRSSCNYTNG FSGFGHDSTS QGSGKASSRA  120
EQERRKGIPW TEEEHRLFLL GLDKFGKGDW RSISRNYVIS RTPTQVASHA QKYFIRLNSM  180
NRDRRRTSIH DITSVNNGDV SSHQMPITGQ SGSTNPPNGT TVGAPMKHRP HQPNMPPGMG  240
MYGAPMGHPV AAVPGHMPSA VGTPVMMPHS HHPPYVMPVA YPMAPPPTMH Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.14e-68MYB family protein