PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000293.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 893aa MW: 101261 Da PI: 8.3648

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000293.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.5e-07	96	177	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+++GF ++k ++k+ g ++ +f Cs++g++++e + ++ +r++++ +++C +l k k + w + HnH+++ Cse_sc000293.1_g090.1 96 AESIGFLIVKGRTKTD--RGYKYSIEFLCSRHGTSAREGLE-DELERQTSTAKINCPFRLLEKFIKgRTGWILRVKCPRHNHDFV 177 899******98888..6667************999.8888899999*****9999988889999889***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MKVFGTEVVL TDWVQSTAES IGFLIVKGRT KTDRGYKYSI EFLCSRHGTS AREGLEDELE 60 RQTSTAKINC PFRLLEKLIK VFDTEVVLTD WVQSTAESIG FLIVKGRTKT DRGYKYSIEF 120 LCSRHGTSAR EGLEDELERQ TSTAKINCPF RLLEKFIKGR TGWILRVKCP RHNHDFVDSF 180 HGHAIQESEL VLVKQLTKQQ VAPRIILSSL KESEPNNVSG IKTIYNAQDK IRRASRGDLT 240 PIQLLLVHLR HQGYTYYPRV NDHTNELDEN FFVHPTSYAM WTTYPEIMLM DSTYNTTMFK 300 LPFFIVVGVT PTKRTFSMAF RFLDCEKEPN FKWVEEFPNA NRLLCRWHIN QNVLKHCRHK 360 FDTVKEYESM DMGFDGYSSD RRCVHALLSA PTGFIGPETG FVQTTTCRVE SQHALLKLYL 420 GSTQSSLDTL LCSVDKIIAA QETAIRASLN TSKIKKLHAC KGTLFNELRY NVSRDALLLI 480 LAESKRDVDP HKCGHQLRGI YAPESVSTQQ PAVKESNHGR PSAKDNKSKA KQNIPDLNKE 540 PPTGHRRSYT KPKKVRDLNE EATRHSSYVG ERSNVPDLNE GPSEGDLRHD LYVPDDSSEY 600 FMAQIPPLFQ RWILGIFNVE GDGNCGYRAL AVGPAPYGYW MTIPETGVAI AAALNCPIIS 660 APAPVLPHLL LQESDDIQWR DIHCVKNTPA RVESPNYVPS SPAYVPPSPA ISPAADEDNF 720 IHRPPPGTED YGCRYFMWKE IFQQKYFGQA SSSTQCSNCE TKDKTINMLL AQNNLLKARI 780 KTLEASLELA RNPVGHSFTA VGVLHLSQWG ICESWISRIG DVMWSCKRRG SVWEELKHIR 840 QAVGFLSRRI EEINDFIAHI LRNQSKRIRY PSTCGTVLGI EMTKFGDSSL NSG

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MKVFGTEVVL TDWVQSTAES IGFLIVKGRT KTDRGYKYSI EFLCSRHGTS AREGLEDELE  60
RQTSTAKINC PFRLLEKLIK VFDTEVVLTD WVQSTAESIG FLIVKGRTKT DRGYKYSIEF  120
LCSRHGTSAR EGLEDELERQ TSTAKINCPF RLLEKFIKGR TGWILRVKCP RHNHDFVDSF  180
HGHAIQESEL VLVKQLTKQQ VAPRIILSSL KESEPNNVSG IKTIYNAQDK IRRASRGDLT  240
PIQLLLVHLR HQGYTYYPRV NDHTNELDEN FFVHPTSYAM WTTYPEIMLM DSTYNTTMFK  300
LPFFIVVGVT PTKRTFSMAF RFLDCEKEPN FKWVEEFPNA NRLLCRWHIN QNVLKHCRHK  360
FDTVKEYESM DMGFDGYSSD RRCVHALLSA PTGFIGPETG FVQTTTCRVE SQHALLKLYL  420
GSTQSSLDTL LCSVDKIIAA QETAIRASLN TSKIKKLHAC KGTLFNELRY NVSRDALLLI  480
LAESKRDVDP HKCGHQLRGI YAPESVSTQQ PAVKESNHGR PSAKDNKSKA KQNIPDLNKE  540
PPTGHRRSYT KPKKVRDLNE EATRHSSYVG ERSNVPDLNE GPSEGDLRHD LYVPDDSSEY  600
FMAQIPPLFQ RWILGIFNVE GDGNCGYRAL AVGPAPYGYW MTIPETGVAI AAALNCPIIS  660
APAPVLPHLL LQESDDIQWR DIHCVKNTPA RVESPNYVPS SPAYVPPSPA ISPAADEDNF  720
IHRPPPGTED YGCRYFMWKE IFQQKYFGQA SSSTQCSNCE TKDKTINMLL AQNNLLKARI  780
KTLEASLELA RNPVGHSFTA VGVLHLSQWG ICESWISRIG DVMWSCKRRG SVWEELKHIR  840
QAVGFLSRRI EEINDFIAHI LRNQSKRIRY PSTCGTVLGI EMTKFGDSSL NSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-10	FAR1 family protein