PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000279.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 298aa    MW: 34178.1 Da    PI: 7.7556
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000279.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.51.3e-32261501128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Ptd+el+v+yL++k+e++kl+    i+e  iy+++P++L +k+ + e++wyf ++r++  ++g+r++r+t+ +g+Wk+  
  Cse_sc000279.1_g060.1  26 LLPGYRFCPTDQELIVNYLQPKLESRKLPP-ARIHEKFIYDYNPEELARKYLSAENKWYFMTPRERVCPNGDRPKRTTNeNGFWKTGN 112
                            579************************999.66**************987778899********************66549****999 PP

                    NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + ev++ +++  g k+ L+fy+   +k +kt W+m ey+ 
  Cse_sc000279.1_g060.1 113 AKVEVCDVTQRRLGYKRNLAFYD---EKKRKTAWLMTEYTT 150
                            999****9**************4...44468********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MYPSIGMDSQ ISANTNQSNR DYVDSLLPGY RFCPTDQELI VNYLQPKLES RKLPPARIHE  60
KFIYDYNPEE LARKYLSAEN KWYFMTPRER VCPNGDRPKR TTNENGFWKT GNAKVEVCDV  120
TQRRLGYKRN LAFYDEKKRK TAWLMTEYTT TDPNLPVGNG TKVLEFNTLN NFVLCKIYKK  180
KKKGDRNMAN EDEGNDEQNL SNDEPSPRRR RLNPGSNLPN EPQHVWIQEA NHHLVAPLQT  240
ANCYQQEANN IDTEGSLTAL TGSAQPFTAQ TLSDNQDIGS NLDAMTSQTR INSSHCCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.18e-32NAC family protein