PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000263.1_g130.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family TCP
Protein Properties Length: 395aa    MW: 44601 Da    PI: 6.6957
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000263.1_g130.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1227.1e-381342923134
                    TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec....... 73 
                             k+drhski T++g+RdRR+Rls+++a+++F Lqd LGfdk+skt++WLl ++++ai +l  +          s+ssasec       
  Cse_sc000263.1_g130.1 134 SKRDRHSKINTARGPRDRRMRLSLDVAKKLFGLQDLLGFDKASKTVDWLLSKSETAILDLLPDrscsfmdvsnSASSASECevlsgtg 221
                            69*************************************************************9*****9988666677775543221 PP

                    TCP  74 eaesssssasnsssg.....................kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134
                            +       +s                           +++++ ++k  ++ a  ++ lak +r++ar rarert ek ++k+
  Cse_sc000263.1_g130.1 222 D-------QS----MaiktgddqattenkvktssgsTKKQKERNTKGVRRCADYHNPLAKATRERARVRARERTVEKRNNKH 292
                            1.......11....1112222334455566666664333333355555666666799999******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MYPSSNNNHN GSTPPKTSFF GTYYNDYDVN NSKTYQENHH TPSSSSPFPL PSPFYIPLED  60
EAVFCEFLQQ QFSPIDHNNY NTINLAHEMT TNIESTTHDY SNNGKVATNY GDDDQCDFST  120
HVEHESSTPM KGPSKRDRHS KINTARGPRD RRMRLSLDVA KKLFGLQDLL GFDKASKTVD  180
WLLSKSETAI LDLLPDRSCS FMDVSNSASS ASECEVLSGT GDQSMAIKTG DDQATTENKV  240
KTSSGSTKKQ KERNTKGVRR CADYHNPLAK ATRERARVRA RERTVEKRNN KHVEVGQHSK  300
FQPCLGQEMY QDVNQLRFWS SFDESQCQCV EQFDRISSNF QSKQGFVGAN SSLMMTSDCS  360
PTNYLFNNQL NSGLTQEHQS YDPQLIGKAF EVNTN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273283RERARVRARER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.29e-26TCP family protein