PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000224.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 716aa MW: 83507 Da PI: 8.6689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000224.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.7	2.3e-24	75	165	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn+YA GF +r++ +k+k+++e++++ +vC+keg+++++ ++ +e ++++r rtgCka l+++k+kdgkw+ + ++ HnH+ Cse_sc000224.1_g060.1 75 FYNQYAFLHGFGIRIHWDYKNKTKNEVYRKLYVCNKEGFKRHRGNSsNEVSKKHRRDVRTGCKAGLRISKTKDGKWCADIFNDTHNHD 162 ****************************************99985677888999****************************** PP FAR1 89 lap 91 l+p Cse_sc000224.1_g060.1 163 LTP 165 985 PP

Sequence ? help Back to Top
Protein Sequence Length: 716 aa Download sequence
MQTRLIEDID KNGYLVDHQN GEYDCERPNY DEVNDDDIWE KPNEDRVNIG CYEIEITDDN 60 ILGNIFNTPD DAYTFYNQYA FLHGFGIRIH WDYKNKTKNE VYRKLYVCNK EGFKRHRGNS 120 SNEVSKKHRR DVRTGCKAGL RISKTKDGKW CADIFNDTHN HDLTPTPMKV MKHCSNNKFH 180 RSMACKSLMV ELGKSGLRPC QVRKAVNAMK SPNEPNVTSK QCFAILAEER KQYKGKEFYS 240 LIKHFQEKAA VANQYFKIDL FDDGSSRKIF WANGRSRDAY LKFGDLVVFD VTYLTNKFKF 300 SFAPFGQSII FGGALLENEK EETFKWLFKQ FLKCMFNKCP SAIITDQDKA ICNAVKHVIP 360 NTRHRYCAWH IKKYVLEHLQ PFRVRYSDFR ESFKQWIRSD TVEEFESQWE VLRDKYNLET 420 SSWMMEMYNQ KKFWVTVFFK DIFLAGMTTS GRSESIHSFF DGFVNSKTIA AEEDEDFQTI 480 NSTPILSSVH PIEAKAGACY TKKIFEVFQK EWIEATRNLT HETKSKSEEK SSYWVNVDKK 540 HWRVVNFCFL DKLDLTCSCA MFETYGILYK VGNASIGIKE TNCENEVSAL ALWYAQANST 600 KAIEQARDAP SEIKRLNNFL VEFLEDQMIR KKPTEIENAC KDARVGISQV DMMPQITVRD 660 PVVLTNTKGR PRNATRVKPP IEVKQKKTVT CSYRRESGHN ITSCKKKKAD CMQEKD

Sequence ? help Back to Top

Protein Sequence Length: 716 aa Download sequence

MQTRLIEDID KNGYLVDHQN GEYDCERPNY DEVNDDDIWE KPNEDRVNIG CYEIEITDDN  60
ILGNIFNTPD DAYTFYNQYA FLHGFGIRIH WDYKNKTKNE VYRKLYVCNK EGFKRHRGNS  120
SNEVSKKHRR DVRTGCKAGL RISKTKDGKW CADIFNDTHN HDLTPTPMKV MKHCSNNKFH  180
RSMACKSLMV ELGKSGLRPC QVRKAVNAMK SPNEPNVTSK QCFAILAEER KQYKGKEFYS  240
LIKHFQEKAA VANQYFKIDL FDDGSSRKIF WANGRSRDAY LKFGDLVVFD VTYLTNKFKF  300
SFAPFGQSII FGGALLENEK EETFKWLFKQ FLKCMFNKCP SAIITDQDKA ICNAVKHVIP  360
NTRHRYCAWH IKKYVLEHLQ PFRVRYSDFR ESFKQWIRSD TVEEFESQWE VLRDKYNLET  420
SSWMMEMYNQ KKFWVTVFFK DIFLAGMTTS GRSESIHSFF DGFVNSKTIA AEEDEDFQTI  480
NSTPILSSVH PIEAKAGACY TKKIFEVFQK EWIEATRNLT HETKSKSEEK SSYWVNVDKK  540
HWRVVNFCFL DKLDLTCSCA MFETYGILYK VGNASIGIKE TNCENEVSAL ALWYAQANST  600
KAIEQARDAP SEIKRLNNFL VEFLEDQMIR KKPTEIENAC KDARVGISQV DMMPQITVRD  660
PVVLTNTKGR PRNATRVKPP IEVKQKKTVT CSYRRESGHN ITSCKKKKAD CMQEKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-80	FAR1 family protein