PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000223.1_g120.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 331aa MW: 37767.6 Da PI: 5.4158

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000223.1_g120.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.7	3.7e-12	168	211	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L Cse_sc000223.1_g120.1 168 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 211 589*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEFHHGFLEE IYNSSFPFGL TKDIDDHFDP NTLLSTPSNF LETSPLSITS QNSCSNFEDF 60 TLPCNFDPQT LNSSSSYGQH FMNPFIDYTP DIKLESSLMN DQDYYNVFSM LDDVQNCHFV 120 HDMSNVPNPE MPGPQGVTGE PVLRKPGSFN ARKNGKNSKV EGQPSKNLMA ERRRRKRLND 180 RLSMLRSIVP KISKMDRTSI LGDTIDYMKE LTDKIKHMQE EMAISSNDQL NSLNAKPKEI 240 YIKNSPKFDV ERRDTDTRVQ VRCTGKPELL ISTLTTLETF GLEIHQCVIS CFNDFAMHAS 300 CSEEMEHRVI IDSEDIKQAL FRNAGYGGKC L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	178	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	8e-67	bHLH family protein