PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000215.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 333aa    MW: 36966.4 Da    PI: 6.1687
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000215.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10155198755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + Er+RR+ +++++  Lr l+P       +K++Ka+i+  A +YI++Lq
  Cse_sc000215.1_g090.1 155 ISERKRRSGMKEKLYVLRALVPYI-----TKMDKASIVGDAARYIHDLQ 198
                            67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MNSFEYSTGH FNKRNFNMFQ PDFIPETDFE NLISAIRCET TDPIEKFCPD FNCHHFTNAC  60
TALQLMPQLY GHNEASDGIG ISNDNASGTS SGNGAKSSIG YDVFDPNLNL MWDQNQEDLK  120
ASGDDDSSET VTAVNPDTQR RSGGGAKGDR TRTLISERKR RSGMKEKLYV LRALVPYITK  180
MDKASIVGDA ARYIHDLQTQ ARNLRSEIAT IEATKSQMSS QNLNKTHVSN SLPVLKNISK  240
MDMFNVEEKG YYVRLVCNKG RGIAGALHKA LESITSFQVQ SSNLATVGDN FVLTFTLNVT  300
TCEFDINLAN LKLWISGAFL NQGFEFSTLF PSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.19e-69bHLH family protein