PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000215.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 356aa    MW: 39653.4 Da    PI: 5.0006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000215.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.5e-10178221755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + Er+RR  +++++  Lr l+P       +K++Ka+i+  A +YI++Lq
  Cse_sc000215.1_g050.1 178 ISERKRRTGMKEKLYALRALVPYI-----TKMDKASIVGDAARYIQDLQ 221
                            67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MESFEYSIGH FTNGNFNMFQ PDFIPETNFE NLLSTIRCET MDPIEKFCLD LECHHFTNSC  60
MAMQLSPQLH GINEANDGMG IDIDRSNGTG IGNGVDFHVD SGSGSGNGID NDNDNDNHSG  120
IGGYDVMDPN LNLMWNQDED DVKVSRDDDS SETATTRNPD TQRNNGGGVK GDRTRTLISE  180
RKRRTGMKEK LYALRALVPY ITKMDKASIV GDAARYIQDL QTQARNLRSE IATIEATKKQ  240
KMSSQNFNKK NVSNSLPVSK KISKMDMFNV EEKGYYVRLV CNKGRGVAVA LHKALESITI  300
FQVQSSNLAT VGDNFVLTFT LNVTACEFDI NLPNLKLWLS GAFLNQGFEF SMFPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.18e-70bHLH family protein