PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000215.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 352aa    MW: 39079.7 Da    PI: 4.7351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000215.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10174217755
                            HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            + Er+RR  +++++  Lr l+P       +K++Ka+i+  A +YI++Lq
  Cse_sc000215.1_g030.1 174 ISERKRRTGMKEKLYALRALVPYI-----TKMDKASIVGDAARYIQDLQ 217
                            67*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
METFEYSIGH FNNSNFNMFQ PDFIPETNFE NLLSTIRCET MDPIEKFCLD LECHHFTNSC  60
MAMQLSPQLY GINEANDGIG IDIDSSNGTG IGNGVDFDVD SGSGSGNGID NNNDNHSGTG  120
YDVMDPNLNL MWNQDEDDVK VSRDDDSSET VTTRNPDTQR SGGSVKGDRT RTLISERKRR  180
TGMKEKLYAL RALVPYITKM DKASIVGDAA RYIQDLQTQA GNLRSEIATI EATKKQKMSS  240
QNLNKKNAPN SLLVLKKISK MDMFNVEEKG YYVRLVCNKG RGVAVAIHKA LESITSFQVQ  300
SSNLATVGDN FVLTFTLNVT ACEFDINLPN LKLWLSGAFL NQGFEFSTFP SP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.13e-68bHLH family protein