PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000193.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 394aa MW: 44595.5 Da PI: 5.2916

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000193.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	53.8	6.6e-17	29	105	52	128
NAM 52 kaeekewyfFskrdkkyatgkrknratk.sgyWk..atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ e++wyf ++r++k+++gkr+nr+tk g+Wk +tg k+ + +++vg k+ L + ++kg+kt W+mhey+ Cse_sc000193.1_g020.1 29 RSCENKWYFLTPRQRKHPNGKRPNRKTKsGGTWKasQTGXGKPQRDDMNQVVGWKTCLFYI---DEKGNKTAWLMHEYTT 105 456789*****************887468966688899999989999*9999888...78899*******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MPETGIEKLF ASNLTGNLFF DTTAKPEYRS CENKWYFLTP RQRKHPNGKR PNRKTKSGGT 60 WKASQTGXGK PQRDDMNQVV GWKTCLFYID EKGNKTAWLM HEYTTDNPNI PLGSQEQIED 120 NNMLTRWVLC KIYKKETKPA NNNVGNQEEA FEEPPRRRRL SLNQESNQSN GPEHVPVQET 180 NYHVETDVQM AESLQFMLTS NQQSDLNIVH GGASQTFPTT SMNTSPNPVT VQPMAMFCGS 240 KLTQPAVQDP PQAFAMDQVQ QSVGSSTLVY YQNQSRPTST NGFQLSCGAS SSSSKVSPPA 300 ILEPGDNDMA PVPHEEDIYD NLAPLDDFMI SPSHALAFQM DTSNEVLQQH VQNSYDDTQR 360 DQMIVFYEEK DLECIMKMRR LERAAENKPF VGLR

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MPETGIEKLF ASNLTGNLFF DTTAKPEYRS CENKWYFLTP RQRKHPNGKR PNRKTKSGGT  60
WKASQTGXGK PQRDDMNQVV GWKTCLFYID EKGNKTAWLM HEYTTDNPNI PLGSQEQIED  120
NNMLTRWVLC KIYKKETKPA NNNVGNQEEA FEEPPRRRRL SLNQESNQSN GPEHVPVQET  180
NYHVETDVQM AESLQFMLTS NQQSDLNIVH GGASQTFPTT SMNTSPNPVT VQPMAMFCGS  240
KLTQPAVQDP PQAFAMDQVQ QSVGSSTLVY YQNQSRPTST NGFQLSCGAS SSSSKVSPPA  300
ILEPGDNDMA PVPHEEDIYD NLAPLDDFMI SPSHALAFQM DTSNEVLQQH VQNSYDDTQR  360
DQMIVFYEEK DLECIMKMRR LERAAENKPF VGLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	2e-20	NAC family protein