PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000189.1_g150.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 719aa MW: 84634.8 Da PI: 8.935

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000189.1_g150.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.4	2.6e-09	20	98	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+++k++ ng++++ +++C+k g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc000189.1_g150.1 20 ASGLGFVIVKKRTKSE--NGQMYEINYRCTKGGIYECHGSG----KRKTKTKKSNCPFRLVAKYRPtRYNWILRVKCDSHNHELL 98 77899999987666..999***********98877....899999**********9888898888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MYFQAFGSHE EVTEWVQNIA SGLGFVIVKK RTKSENGQMY EINYRCTKGG IYECHGSGKR 60 KTKTKKSNCP FRLVAKYRPT RYNWILRVKC DSHNHELLES LHGMPYAMRL KDDELSLVKE 120 LSEYSCDSHN HELLESLHGM PYAMRLKDDE LSLVKELSEY SVRPRNILSK IKGRNPDNVS 180 SVRTIYNALD KFRRARVGDR TQIQVLCSHL TDSGYAYYPR VNEHNELEEL FFVHPTSYAL 240 WRTFPEIMLM DSTAEFSTAH KLLCRWHIEQ NLLKFMRNRC SGIDEYDSIK RRWDRLVKAP 300 TRRLFEQHYE RLRQRLVNHA PIAEYLDNWL RDYRHMFVSY ITDEYRSFGQ TTTCRVEAHH 360 ALLKLYLGGK QSNLDRLLSA IDKIVFAQEN AIKECFNRSI IEKINNCNIL LFQELWYKVS 420 HHAFKLMHKE LHLSITVEDC SHKLCTIYGL PCFHEMQYYV YNGHRLKMAL PHHHHHHHDT 480 SFRDDIRQFK NVFTKASSFV KNNMITKLRS IYQLASDDTR EPVIQKNTRG RPSAKDKMGK 540 ATQVPDLNED PDLNEVPTVD HRRSTATRST QVPNFNKEPA RHSSFTGPSD QPKIRHMLYD 600 GDAESDMLMG MLPVLWHPYI ISIYNVVGDG NCGFRCVAYG VWEQQHLWRQ VRQMLLQQMD 660 LHWQVYMGLW GEVGFNELRR TIDWSGHGNA PTDRYMEMPN TMLVIAELIR RPVAFISLR

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MYFQAFGSHE EVTEWVQNIA SGLGFVIVKK RTKSENGQMY EINYRCTKGG IYECHGSGKR  60
KTKTKKSNCP FRLVAKYRPT RYNWILRVKC DSHNHELLES LHGMPYAMRL KDDELSLVKE  120
LSEYSCDSHN HELLESLHGM PYAMRLKDDE LSLVKELSEY SVRPRNILSK IKGRNPDNVS  180
SVRTIYNALD KFRRARVGDR TQIQVLCSHL TDSGYAYYPR VNEHNELEEL FFVHPTSYAL  240
WRTFPEIMLM DSTAEFSTAH KLLCRWHIEQ NLLKFMRNRC SGIDEYDSIK RRWDRLVKAP  300
TRRLFEQHYE RLRQRLVNHA PIAEYLDNWL RDYRHMFVSY ITDEYRSFGQ TTTCRVEAHH  360
ALLKLYLGGK QSNLDRLLSA IDKIVFAQEN AIKECFNRSI IEKINNCNIL LFQELWYKVS  420
HHAFKLMHKE LHLSITVEDC SHKLCTIYGL PCFHEMQYYV YNGHRLKMAL PHHHHHHHDT  480
SFRDDIRQFK NVFTKASSFV KNNMITKLRS IYQLASDDTR EPVIQKNTRG RPSAKDKMGK  540
ATQVPDLNED PDLNEVPTVD HRRSTATRST QVPNFNKEPA RHSSFTGPSD QPKIRHMLYD  600
GDAESDMLMG MLPVLWHPYI ISIYNVVGDG NCGFRCVAYG VWEQQHLWRQ VRQMLLQQMD  660
LHWQVYMGLW GEVGFNELRR TIDWSGHGNA PTDRYMEMPN TMLVIAELIR RPVAFISLR