PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000180.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 192aa    MW: 20327.5 Da    PI: 4.6957
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000180.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.1e-181969255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           +y+GVr+++++g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  Cse_sc000180.1_g080.1 19 KYRGVRQRRSSGKWVSEIREPK----SpNRIWLGSFATPEMAAVAYDVAALALKG 69
                           8*******************93....578***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSKNDTTSPS ASFSGKNVKY RGVRQRRSSG KWVSEIREPK SPNRIWLGSF ATPEMAAVAY  60
DVAALALKGS DAELNFPDTA SSLPVPASNA ARDIQAAAAC AAEAAGAAMD SFLAGYDHGH  120
GHGHDQGHGG AVVTVEQPLI GGGTFVDEDM IFNMPNVLAN MAEGMLLSPP RLDFFSEETE  180
TGNSVDHDLW NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.13e-38ERF family protein