PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000174.1_g070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26819.8 Da PI: 7.7252 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.2 | 0.00033 | 50 | 98 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r + erE+ R+++N+ f eL l + + Ka+iL ++++ +k+ Cse_sc000174.1_g070.1 50 KRIHKAEREKLKREHLNELFLELAGALELS----EQNSGKASILGETTRVVKD 98 688899*********************997....4566678888888887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MHASLKQLPA TLLFTTLLLV TTRLPLLSQL LSPREASLQP SKKSPGKIPK RIHKAEREKL 60 KREHLNELFL ELAGALELSE QNSGKASILG ETTRVVKDMV DQIKSLRKEN AALLSESQYV 120 TIERNELQDE ASTLQNQISV LRSMIKERTV QINLDLNAPA IETHEPQYFP QDIIRLPSGD 180 PVLNPVFVIP TCQNVQINPQ TVSNVSKPNP RYPTASDSWP FQLLEKPSQE VGEIQHRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 5e-39 | bHLH family protein |