PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000148.1_g170.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 850aa MW: 97189.5 Da PI: 8.7721

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000148.1_g170.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33	2e-10	134	234	15	90
FAR1 15 rkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgCkaklkvkkekdgkw 76 ++ ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+g a+l++kk + + Cse_sc000148.1_g170.1 134 KRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsitdndisgqseisddshrfgdvKKKQTRKRTSFRCGYSASLTIKKI-GNIY 220 55667777788889999*********999999*******************77777777777888888999999999.9* PP FAR1 77 evtkleleHnHela 90 ev+k+e HnH+l+ Cse_sc000148.1_g170.1 221 EVKKFEDGHNHPLV 234 ************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 850 aa Download sequence
MNTVCSSSSN NECSSSINNE CSSSSSMNID NGSRNEEGFT MATSNKTLLV IAHLNWFSMF 60 VAPPRFAASL YFETLPLPHF AALSDLAAPF HLAAPPHFQP PPHSLDLPHL HLLPPLLHQV 120 HKSHPSRSLG DAAKRGGQYK AKGFSDATLK YFYCSRQGLN EDSNGKSGDS ITDNDISGQS 180 EISDDSHRFG DVKKKQTRKR TSFRCGYSAS LTIKKIGNIY EVKKFEDGHN HPLVAEKDMI 240 FLKNSRKMGY TKQHFLYQVS NANFGPAVGF RLMKXQVYGG FDRVGTTVID CKNQKKKISV 300 FIGDRDAQMA VEKLLSRKLH SPGDDDKLVG LFWADEEAIK DYASFGDIVS FDATFRSNKY 360 EMVFVPFTGI NHHNRCLTFA SGLLADESVG AYIWLFEQFK EAFGKEPEVV ITDQDPSMKI 420 AIEECFPNTR YRLCMWHIMQ KLTTKVGTAL CNRTDFKQRI CDIVWTDQIL PEEFETEWDR 480 MINDFELSNN KWLGDMFNMR ERWIPAYLRD DLCVLLQDQK VRTIFFGKWT SPHLTLVEFL 540 SHYDTAIEYQ RYIERKNDHD SRYKTPKFKT EHPMEKEACK LYTRTLFFDV HDEIFGSYKY 600 CIGLSVVQAE NMEKYAIRDT EFRNRKSGDN DFAVYQDEQC QGVSSKLLKK RWLKNTKPSR 660 SALPRIIGAS DLVRNEVLDM YEIFESTVDR LVHDLSKMHI YKDKLQELFN QAVIDIPTVP 720 KCDGKDVMSS MLGVKEPEKK TMNNPGKIPK CDGKAVMSSM LGVKEPEKKT MNNPGKSKTK 780 GTGCFSRFKP IAEVSAEELS KRRTCGVCGQ KEGHNSRTCT RQMVETTPSK KKKIQEQPRR 840 EGLRQSKRKN

Sequence ? help Back to Top

Protein Sequence Length: 850 aa Download sequence

MNTVCSSSSN NECSSSINNE CSSSSSMNID NGSRNEEGFT MATSNKTLLV IAHLNWFSMF  60
VAPPRFAASL YFETLPLPHF AALSDLAAPF HLAAPPHFQP PPHSLDLPHL HLLPPLLHQV  120
HKSHPSRSLG DAAKRGGQYK AKGFSDATLK YFYCSRQGLN EDSNGKSGDS ITDNDISGQS  180
EISDDSHRFG DVKKKQTRKR TSFRCGYSAS LTIKKIGNIY EVKKFEDGHN HPLVAEKDMI  240
FLKNSRKMGY TKQHFLYQVS NANFGPAVGF RLMKXQVYGG FDRVGTTVID CKNQKKKISV  300
FIGDRDAQMA VEKLLSRKLH SPGDDDKLVG LFWADEEAIK DYASFGDIVS FDATFRSNKY  360
EMVFVPFTGI NHHNRCLTFA SGLLADESVG AYIWLFEQFK EAFGKEPEVV ITDQDPSMKI  420
AIEECFPNTR YRLCMWHIMQ KLTTKVGTAL CNRTDFKQRI CDIVWTDQIL PEEFETEWDR  480
MINDFELSNN KWLGDMFNMR ERWIPAYLRD DLCVLLQDQK VRTIFFGKWT SPHLTLVEFL  540
SHYDTAIEYQ RYIERKNDHD SRYKTPKFKT EHPMEKEACK LYTRTLFFDV HDEIFGSYKY  600
CIGLSVVQAE NMEKYAIRDT EFRNRKSGDN DFAVYQDEQC QGVSSKLLKK RWLKNTKPSR  660
SALPRIIGAS DLVRNEVLDM YEIFESTVDR LVHDLSKMHI YKDKLQELFN QAVIDIPTVP  720
KCDGKDVMSS MLGVKEPEKK TMNNPGKIPK CDGKAVMSSM LGVKEPEKKT MNNPGKSKTK  780
GTGCFSRFKP IAEVSAEELS KRRTCGVCGQ KEGHNSRTCT RQMVETTPSK KKKIQEQPRR  840
EGLRQSKRKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-66	FAR1 family protein