PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000136.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 291aa MW: 31326.1 Da PI: 6.527

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000136.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	111.9	8.9e-35	38	108	5	74
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.e 74 +++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a++ai+ +tgt++ +a ++ Cse_sc000136.1_g070.1 38 RKSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEEAIIRATGTGTVPAIAVnV 108 789**********************************************************8888844421 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MESEEKEVEG PVEITFFKEE PMMENNETKQ MITQVLPRKS TKDRHTKVEG RGRRIRMPAT 60 CAARIFQLTR ELGHKSDGET IRWLLEHAEE AIIRATGTGT VPAIAVNVNG TLKIPTTTSS 120 NGEEGDGRKR NRGGNSEFYD VNDSGFAPVA PVVPQGLMPV WTMGAPQGGT FFVIPPSGAP 180 SSAHMPHLWA IPAGATPVFN VPMSSYVSAM QASDHSGASG VDGVQTSSGS ISNSSESEDK 240 SGKVLTKSAP SSSSNSSQVP KDFWLKIYEK RELEFMVGSS KDQNPSPKVS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	GRKRNRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-61	TCP family protein