PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000123.1_g110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Trihelix | ||||||||
Protein Properties | Length: 177aa MW: 20246.8 Da PI: 4.6096 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 65.3 | 1.3e-20 | 54 | 114 | 2 | 62 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkryk 62 W+++e+++Li +r e+e ++ +k++k+lWe v++km+e g+ rs qCk+kw+nl +ryk Cse_sc000123.1_g110.1 54 WSERETRDLIVIRGELEGDFVVSKRNKGLWEVVGSKMKELGYARSGDQCKCKWKNLVTRYK 114 ************************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MFNTNTGSDM NPNNNETLAH LTQMMMMNIP QEQQPGIISG GVGEVEEYGR VAAWSERETR 60 DLIVIRGELE GDFVVSKRNK GLWEVVGSKM KELGYARSGD QCKCKWKNLV TRYKVYDLDF 120 DYEALNDNEM LMLLEAIGDY HDSTRFYHMV LENFGIPEGH DVFVTKLKDS LHSENAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 4e-21 | Trihelix family protein |