PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000111.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 461aa MW: 51011.4 Da PI: 7.266

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000111.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6e-32	242	297	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Cse_sc000111.1_g040.1 242 KTRRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 297 68****************************************************97 PP
2	Myb_DNA-binding	40.4	6.9e-13	244	295	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ Cse_sc000111.1_g040.1 244 RRCWSPDLHRRFVNALQMLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 295 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MMAPASELSL ECKPHSYSML LKTIGEQQLT NGHDKKQKLE EFLSRLEEER LKIDAFKREL 60 PLCMQLLTNA METSRQQLQS YRANQGPPVL EEFIPMKNSN SEGPENASLS NIDNKANWMT 120 SAQLWSQASS TITTTNTDNT NHAKTSQNAT NETDIHFNAK QRNGGGFLPF TKERNSSSPN 180 PTLVLPELAL SSGDKDLDHE ENKHCLRENN SMNKGGNDTT ENQITTTTTI TGTATNSQTH 240 RKTRRCWSPD LHRRFVNALQ MLGGSQVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR 300 PSPSPQSAGN QTPQLVVLGG IWVPPEYATA AGAQTLYTTH PNATHNNPHY CTPQEFYASP 360 ALGPPQPLHH HHNAGPANHH HQLHHHSQMY KPTSQTTTQS LPESNGRGGT TTTGGNRSES 420 IEDGKSESGG SWKADSGVET KAMVLREECE GSNGSEITLK F

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MMAPASELSL ECKPHSYSML LKTIGEQQLT NGHDKKQKLE EFLSRLEEER LKIDAFKREL  60
PLCMQLLTNA METSRQQLQS YRANQGPPVL EEFIPMKNSN SEGPENASLS NIDNKANWMT  120
SAQLWSQASS TITTTNTDNT NHAKTSQNAT NETDIHFNAK QRNGGGFLPF TKERNSSSPN  180
PTLVLPELAL SSGDKDLDHE ENKHCLRENN SMNKGGNDTT ENQITTTTTI TGTATNSQTH  240
RKTRRCWSPD LHRRFVNALQ MLGGSQVATP KQIRELMKVD GLTNDEVKSH LQKYRLHTRR  300
PSPSPQSAGN QTPQLVVLGG IWVPPEYATA AGAQTLYTTH PNATHNNPHY CTPQEFYASP  360
ALGPPQPLHH HHNAGPANHH HQLHHHSQMY KPTSQTTTQS LPESNGRGGT TTTGGNRSES  420
IEDGKSESGG SWKADSGVET KAMVLREECE GSNGSEITLK F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-107	G2-like family protein