PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000102.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 303aa    MW: 35000.6 Da    PI: 4.8717
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000102.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind102.92.8e-32141062103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F+ k ye+++d++++ +isws  ++sf+v++e+ f++++LpkyFkh+ f+SF RQLn+YgFkk ++++         weF+++ F k+
  Cse_sc000102.1_g010.1  14 FILKCYEMVDDPTTDYMISWSLANDSFIVWNESLFTSQLLPKYFKHNTFSSFQRQLNIYGFKKNDTDR---------WEFANEGFIKD 92 
                            9********************889***************************************99988.........*********** PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            +k+ll +i+rkk +
  Cse_sc000102.1_g010.1  93 QKHLLMSINRKKPS 106
                            ***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MVKNNNSSSN IAPFILKCYE MVDDPTTDYM ISWSLANDSF IVWNESLFTS QLLPKYFKHN  60
TFSSFQRQLN IYGFKKNDTD RWEFANEGFI KDQKHLLMSI NRKKPSQVTP QQKVTKPKMI  120
TATPHEGNPY AVLWKEVESL KTDKNVLMHE LVKQRQHQTT SQNKMLVLQD QLKGMEQNQQ  180
QMLSFIVIAM QSLESNWLES ELNSNTILNP VKKDSEPVVK PCEGAIVKYQ PPFVEHDSTS  240
EDSLEMDLTS DEVKDLLENM DVMCGSPVRE NDDPFVFHDM SDSDRMMDQM LSSPSSDNKT  300
TSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.17e-65HSF family protein