PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000080.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 25102.6 Da PI: 9.4622 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.7 | 1.2e-14 | 42 | 95 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 ++ +hn+ Er RR+r+N+ ++ Lr+llP +s ++kK +s +++ Av+YI +Lq Cse_sc000080.1_g040.1 42 KKLNHNAGERDRRKRVNDLYSYLRSLLPIPS--YHKKkVSIPDTVSSAVKYIPELQ 95 6789*************************62..55555***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
TKFHTFDIYT YNQTMQHFEQ ENSTSSGIAA NGSTGDDTMG AKKLNHNAGE RDRRKRVNDL 60 YSYLRSLLPI PSYHKKKVSI PDTVSSAVKY IPELQTEVET LKRKKEKVQW SSSPTMNAKQ 120 EHLAIKKKSC KTKTNSFLVS SVNVLGDKEV VIQLISSTDH TSTNKEIGFL SKVLENLEHD 180 EKGFVVLNAT TMKCSGEGMV LNTLHLQVYL SIFVPITISF ELL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 128 | KRKKEKVQWSSSPTMNAKQEHLAIKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-32 | bHLH family protein |