PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000073.1_g130.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 801aa MW: 92133.9 Da PI: 8.3492

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000073.1_g130.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	7e-20	106	210	3	90
FAR1 3 YneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++YA+e GF+vr+ +k++ ++++ + f+C ++g++ ++k + ++ +rr+ra+ r+gC+a+l++kk+ d Cse_sc000073.1_g130.1 106 YKNYAREGGFEVRRGGQKNTtDKKEDPSLKYFYCVRQGFKPTRKPEdsqtdktrnanplgvtKVIKRRKRASCRCGCTAQLRLKKRPD 193 9***********97777646666788899****9999888899*******9999999***************** PP FAR1 74 gkwevtkleleHnHela 90 gk+ vtkl ++HnH+l+ Cse_sc000073.1_g130.1 194 GKYFVTKLIEKHNHSLV 210 ************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MDCPVPNHHV DDYVEGEPLS PLEIPTVVGD PSTPREIPIG VGEPLTPRAI HIEQDTYVEG 60 YYTPPEHQVG TFQPTPKGTK FWIPKANNKL ADGAVFDTIE LALTAYKNYA REGGFEVRRG 120 GQKNTTDKKE DPSLKYFYCV RQGFKPTRKP EDSQTDKTRN ANPLGVTKVI KRRKRASCRC 180 GCTAQLRLKK RPDGKYFVTK LIEKHNHSLV YEDDIKYLRA SRRLTFSKQQ LINKLSNVNI 240 GPVRSWKVMK EMYGGFEYIG ATDVECKNYR RGLNDFIGGR DAQMVVDKLL SREEFFTDFS 300 VKYKLDEKTK ALVGLFWADE QAKRNYEAFG DVVSFDATFR SNRYVLVPTS NTDFSIKYKL 360 DEKTKALVGL FWADEQAKRN YEAFGDIVSF DATFRSNRYN MVLVPFIGID NHNRCIIFVA 420 ALLATESAIR YTWLLKKFKK VFVKVPKVVV TDQDPSMKIA IEEMLPDTRH RLCMWHIMQK 480 LTTKVGPALC SNTDFKRRLC DIVWTNKIEP DVFDEQNEPM SGLMRTTSRS ESENHFFGQL 540 TNPHLSLIEF VSHFDTAMDY QRYKYGKNTH DSRYKTPDLK TNLEVEKEAV ELYTHTLFYD 600 VQDEIWSSLY HCCSLSVQED DTSLSKVYHF PRKYLLRRWS KNALPNKSVR RQIDVASSSN 660 PVEFVNGVIR EIYVSVEDSV TRLVTDIQKL DIYKDDIAAL CEQVKLDIPN APEMNKNELY 720 AAALGVKEPV EINIIAPECR NKGSVTLKRH QTQAEIAMIQ SNKPPRHCSY CDTYGYHDSR 780 NCPKKKADLD AQMSDTNDVS E

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MDCPVPNHHV DDYVEGEPLS PLEIPTVVGD PSTPREIPIG VGEPLTPRAI HIEQDTYVEG  60
YYTPPEHQVG TFQPTPKGTK FWIPKANNKL ADGAVFDTIE LALTAYKNYA REGGFEVRRG  120
GQKNTTDKKE DPSLKYFYCV RQGFKPTRKP EDSQTDKTRN ANPLGVTKVI KRRKRASCRC  180
GCTAQLRLKK RPDGKYFVTK LIEKHNHSLV YEDDIKYLRA SRRLTFSKQQ LINKLSNVNI  240
GPVRSWKVMK EMYGGFEYIG ATDVECKNYR RGLNDFIGGR DAQMVVDKLL SREEFFTDFS  300
VKYKLDEKTK ALVGLFWADE QAKRNYEAFG DVVSFDATFR SNRYVLVPTS NTDFSIKYKL  360
DEKTKALVGL FWADEQAKRN YEAFGDIVSF DATFRSNRYN MVLVPFIGID NHNRCIIFVA  420
ALLATESAIR YTWLLKKFKK VFVKVPKVVV TDQDPSMKIA IEEMLPDTRH RLCMWHIMQK  480
LTTKVGPALC SNTDFKRRLC DIVWTNKIEP DVFDEQNEPM SGLMRTTSRS ESENHFFGQL  540
TNPHLSLIEF VSHFDTAMDY QRYKYGKNTH DSRYKTPDLK TNLEVEKEAV ELYTHTLFYD  600
VQDEIWSSLY HCCSLSVQED DTSLSKVYHF PRKYLLRRWS KNALPNKSVR RQIDVASSSN  660
PVEFVNGVIR EIYVSVEDSV TRLVTDIQKL DIYKDDIAAL CEQVKLDIPN APEMNKNELY  720
AAALGVKEPV EINIIAPECR NKGSVTLKRH QTQAEIAMIQ SNKPPRHCSY CDTYGYHDSR  780
NCPKKKADLD AQMSDTNDVS E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-33	FAR1 family protein