PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000062.1_g190.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 298aa MW: 33183.5 Da PI: 6.1233

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000062.1_g190.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.9	1.3e-06	180	253	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC..........................TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkas.......................kapskKlsKaeiLekAveYIksLq 55 h+ +RR+ri +++ L++l+P+ s + ++ +++LekA+ Y+k Lq Cse_sc000062.1_g190.1 180 HKRTHSNRRERISERLKVLQDLVPNGSkviistnqdpdyhfairnlytyvHSFTLQVDLVTMLEKAISYVKFLQ 253 5556679****************666*****************9889999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MALAKERNPN DHSSHMPGLV HQSYKFYGDS ESPEKKGNFT GSSSNSSSLS SPGSATNSSG 60 LLFRASASHQ QQLQQEEGHS VISFKPGYYD NNFVQGGSAS CFLSFEENDE QPYSSNLSPD 120 QLMNLGSGSF DSIRLLENMS CIQSGSIKEN NHHDELESFA WPNPSSSDNY LATQEQPSFH 180 KRTHSNRRER ISERLKVLQD LVPNGSKVII STNQDPDYHF AIRNLYTYVH SFTLQVDLVT 240 MLEKAISYVK FLQLQVKVLA TDEFWPVQGG KAPELSQVKD AIDAILSSSQ RDRSSSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66470.1	2e-36	bHLH family protein