PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000049.1_g210.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 600aa MW: 67889 Da PI: 7.7511

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000049.1_g210.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.3e-17	103	198	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tgCka++++++++ +gk+++ ++ Cse_sc000049.1_g210.1 103 EMYSTYAEAGGFQIKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSGKYKLVQF 189 58*************99888.778899*******99877777889888899999999********************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc000049.1_g210.1 190 IAKHNHVLI 198 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MNENQNLIDV IDENNLIEVP LDVVNTTSVV DDLRDLEDDL PSVEDTTCFV KKEIEADSMR 60 SPRPTLYEHA ETPGGSIYWE PHVEGIRVPE EGKYYDTIEE AIEMYSTYAE AGGFQIKKSG 120 QRLTKSGMVQ HKYIMCNKEG IPRRINIDTL DPQNSDKQKR NTTLHITGCK ARIRLELDQV 180 SGKYKLVQFI AKHNHVLIPK EYKHFTKKQR RMTQADKMFI VKAATNKIGA TQAHNFLTSL 240 KGGYEYVHGT SDDFKNHQRD INAFIGESDA EMLINKMENR KMYVPNFTFQ YMVENSELVA 300 MFWADEVAKC NYKEFGEIVS FDATFRNQDG AMKKAIEVVF TNSKHRLCMW HIDQKIPAKN 360 LKIEDGCEIV MVRDKNPMPY RTLNKEIEDE SDTEAQTVVD YKVLRTIEDG SVVCSCRHFA 420 RYGDVVKMGE FVEKMKKLKK EVEDEVPNAP SEKTADVIRE HFAISKPEKK TVNNPTKASN 480 KGNISEAERN KWRKSEREKE LTIKKKQMKP CGHCGEKTNS HTKTTCPLNP KARRKAPHNR 540 LQSGVDNPSG SGLGVGTGSV VGQVVQVNVV AREADKVNPN GSGVSVKVGG SVPSEPTSVD

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MNENQNLIDV IDENNLIEVP LDVVNTTSVV DDLRDLEDDL PSVEDTTCFV KKEIEADSMR  60
SPRPTLYEHA ETPGGSIYWE PHVEGIRVPE EGKYYDTIEE AIEMYSTYAE AGGFQIKKSG  120
QRLTKSGMVQ HKYIMCNKEG IPRRINIDTL DPQNSDKQKR NTTLHITGCK ARIRLELDQV  180
SGKYKLVQFI AKHNHVLIPK EYKHFTKKQR RMTQADKMFI VKAATNKIGA TQAHNFLTSL  240
KGGYEYVHGT SDDFKNHQRD INAFIGESDA EMLINKMENR KMYVPNFTFQ YMVENSELVA  300
MFWADEVAKC NYKEFGEIVS FDATFRNQDG AMKKAIEVVF TNSKHRLCMW HIDQKIPAKN  360
LKIEDGCEIV MVRDKNPMPY RTLNKEIEDE SDTEAQTVVD YKVLRTIEDG SVVCSCRHFA  420
RYGDVVKMGE FVEKMKKLKK EVEDEVPNAP SEKTADVIRE HFAISKPEKK TVNNPTKASN  480
KGNISEAERN KWRKSEREKE LTIKKKQMKP CGHCGEKTNS HTKTTCPLNP KARRKAPHNR  540
LQSGVDNPSG SGLGVGTGSV VGQVVQVNVV AREADKVNPN GSGVSVKVGG SVPSEPTSVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-20	FAR1 family protein