PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000028.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 434aa MW: 50277.3 Da PI: 8.2632

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000028.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.8	1.3e-16	94	200	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA ++ Fs+rks+sk++ +ge+t++ + Cs+ gk++++ k + +++r+++ + t+Cka+++ + Cse_sc000028.1_g090.1 94 DMYLEYALKARFSIRKSTSKRK--KGEVTHKYLLCSRAGKPRTTIVKdtlaqssktddnqkdgtdKPRQKRNSNYSVTDCKACVRFRA 179 58*************99988..999**********99988889**********87777778888899******* PP FAR1 71 ek.dgkwevtkleleHnHela 90 + ++ +++++++++HnH+l Cse_sc000028.1_g090.1 180 IHgTSAFKLYEFVENHNHPLL 200 9****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MNSSIGNDDQ KEVSVTVVSP MQTEANVHTQ SSINDEQVIV NEDLSSDYSD LDDSDLDDEC 60 IPTPKGHKYW VPEVPADEKP SEGNVFDTFD EAYDMYLEYA LKARFSIRKS TSKRKKGEVT 120 HKYLLCSRAG KPRTTIVKDT LAQSSKTDDN QKDGTDKPRQ KRNSNYSVTD CKACVRFRAI 180 HGTSAFKLYE FVENHNHPLL DENNTDLLKA RCKLDFSDKL FIHRASLSNL GPTKAHRLRV 240 AFMGSYQKVR GKPSDWKNFR RSVNKYIGPR DAQMLIDKMN DRKKHWILTS FKKAHVKEPI 300 LAVTDQDPAL RTAVEAVFPE AHHRLCMWHI TQKLPGKICG EVESDSEFKK LFHKLIWNIC 360 GEVKSDSEFK KLFHKLIWNL FIEPSEFEER WHALIGMFNF SENKWLSDMF KMRDLWIPAY 420 FKELPMCCLM KTTS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MNSSIGNDDQ KEVSVTVVSP MQTEANVHTQ SSINDEQVIV NEDLSSDYSD LDDSDLDDEC  60
IPTPKGHKYW VPEVPADEKP SEGNVFDTFD EAYDMYLEYA LKARFSIRKS TSKRKKGEVT  120
HKYLLCSRAG KPRTTIVKDT LAQSSKTDDN QKDGTDKPRQ KRNSNYSVTD CKACVRFRAI  180
HGTSAFKLYE FVENHNHPLL DENNTDLLKA RCKLDFSDKL FIHRASLSNL GPTKAHRLRV  240
AFMGSYQKVR GKPSDWKNFR RSVNKYIGPR DAQMLIDKMN DRKKHWILTS FKKAHVKEPI  300
LAVTDQDPAL RTAVEAVFPE AHHRLCMWHI TQKLPGKICG EVESDSEFKK LFHKLIWNIC  360
GEVKSDSEFK KLFHKLIWNL FIEPSEFEER WHALIGMFNF SENKWLSDMF KMRDLWIPAY  420
FKELPMCCLM KTTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G19990.1	1e-16	FAR1 family protein