PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000019.1_g130.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 750aa MW: 87209.8 Da PI: 8.4729

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000019.1_g130.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.9	3e-17	56	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y k+ GF+ r+ ++k k t + f+Cs++g +e+++ k ++k+ r+r++ r+gC Cse_sc000019.1_g130.1 56 NFYVAYVKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSNGKsgdsvtdndisgqseisndshrfgdvKRKQTRKRTSFRCGC 143 6***************************************999999*******************9888888899999 PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 +l+++k+ + +evtk+e HnH+l+ Cse_sc000019.1_g130.1 144 STSLTINKK-GNIYEVTKFEDGHNHPLV 170 **999.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MLTENDSVSA DVETVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIS IDRAYNFYVA 60 YVKKGGFDCR RGGQYKAKGF SDATLKYFYC SRQGLNEDSN GKSGDSVTDN DISGQSEISN 120 DSHRFGDVKR KQTRKRTSFR CGCSTSLTIN KKGNIYEVTK FEDGHNHPLV AEKDMIFLKN 180 SRKMGYTKQH FLYQVSNANF GPAIGFRLMK QVYGGFDRVG TTVIDCKNQK KKISVFIGDR 240 DAQMAVEKLL SRKLHSPGFY VNYYKGDDDK LVGLFWADEE AIKDYASFGD IVSFDATFRS 300 NRYEMVFVPF TGINHHNRCL TFASGLLADE SAGAYIWLLE QFKEAFGKEP EVVITDQDPS 360 MKIAIEECFP NTRHQQILPE EFETEWDRMI NDFELSDNKW LDDMFNMRER WISAYLHDVH 420 MAGLMRTTSR SESENHFFGK WTSPHLTLVE FLSHYDTAIE YQRYIERKND HDSRYKTPKF 480 KTEHPMEKEA CKLYTRTLFF DVQDEILGSY KYFIGLSVAQ YENMEKYAIR DTEFRNRKSG 540 DNDFAVDFRK SEMIVQCSCN RYESYGLLCR HAFYVLRMNN VKEFPRNYLK KRWLKNTKPS 600 RSTLPRIIGA SDLVRNEVLD MYEIFESTVD RLVHDLSKMH IYKDNICILL KSCTKRSTVD 660 SKISYISRTS FRTKSDAPII LGRADLEGLP IAEVSAEELS KRRTCGVCGQ KECHNSRTCT 720 RQMVETTPSK KKNIQEQPRR EVLRQSKRKN

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MLTENDSVSA DVETVRIRDH VGFYVCGKDG TRTWYPDCLE KPIEGCQFIS IDRAYNFYVA  60
YVKKGGFDCR RGGQYKAKGF SDATLKYFYC SRQGLNEDSN GKSGDSVTDN DISGQSEISN  120
DSHRFGDVKR KQTRKRTSFR CGCSTSLTIN KKGNIYEVTK FEDGHNHPLV AEKDMIFLKN  180
SRKMGYTKQH FLYQVSNANF GPAIGFRLMK QVYGGFDRVG TTVIDCKNQK KKISVFIGDR  240
DAQMAVEKLL SRKLHSPGFY VNYYKGDDDK LVGLFWADEE AIKDYASFGD IVSFDATFRS  300
NRYEMVFVPF TGINHHNRCL TFASGLLADE SAGAYIWLLE QFKEAFGKEP EVVITDQDPS  360
MKIAIEECFP NTRHQQILPE EFETEWDRMI NDFELSDNKW LDDMFNMRER WISAYLHDVH  420
MAGLMRTTSR SESENHFFGK WTSPHLTLVE FLSHYDTAIE YQRYIERKND HDSRYKTPKF  480
KTEHPMEKEA CKLYTRTLFF DVQDEILGSY KYFIGLSVAQ YENMEKYAIR DTEFRNRKSG  540
DNDFAVDFRK SEMIVQCSCN RYESYGLLCR HAFYVLRMNN VKEFPRNYLK KRWLKNTKPS  600
RSTLPRIIGA SDLVRNEVLD MYEIFESTVD RLVHDLSKMH IYKDNICILL KSCTKRSTVD  660
SKISYISRTS FRTKSDAPII LGRADLEGLP IAEVSAEELS KRRTCGVCGQ KECHNSRTCT  720
RQMVETTPSK KKNIQEQPRR EVLRQSKRKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-81	FAR1 family protein