PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000009.1_g100.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 378aa    MW: 41397 Da    PI: 8.1661
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000009.1_g100.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.16.5e-08181199625
                            -SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   6 CrffartGtCkyGdrCkFaH 25 
                            C++f++ G+C++G++CkF H
  Cse_sc000009.1_g100.1 181 CNNFLK-GFCRFGASCKFLH 199
                            ******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MQQQFNPQQQ NQMQQQFNPQ QQNQMQQQFN PQQGYYPQMT SPLSQTQDPR SFSLINTLDL  60
DDDEFDQLFS QASKGPTQPF KLTHSSRILG SSLDNDDVVT FALEGLPTRY NNVATIIAHR  120
DPFPDLKTVR SMLTTEEMRE KARVQDPLFD STPSSLTVLL ANTGSNTRRS SSLTDKVHKS  180
CNNFLKGFCR FGASCKFLHN GVHGSSAHQP PTSTNTLSPN DLQTLQHLLA KMVCNGTSIL  240
PQLNISTPST PVALYTHPSP GYSLTHSPPG FGSPITSPSA TPQPVNPAIY GLTGQYPQVH  300
HSGQSTTTGH YPQNQAVQSP QVSYPGQSTV TVHSSAGATC ILGPAPVQFG LTGHSSTPVQ  360
QAHAYCPRLR FLNSTTYR