PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.55_1s0004.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

bZIP

Protein Properties

Length: 660aa MW: 69259.9 Da PI: 10.2829

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.55_1s0004.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.4	1.8e-09	192	246	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k++ r++ NR +A rsRqRK+++++ Le+ +k+ ++ ++ k + +el +e +k+ Bobra.55_1s0004.1.p 192 KKQGRMIANRQSAHRSRQRKLQYVQDLENSIKKVDEDVSRRKRRRDELLEEGKKM 246 8999***************************999887777777777776666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MSPPGGGGLP SENHNQINRL QFCQTQGTFE EHIYLEHPMS FPPSGAAPES DGRNRAGSQR 60 TVPPLPRTGL RTQRSSRSAA SGGGLATSLD LSGFSSGSGA TKDLQGLRIS SEDGGRANAG 120 ARESGLSTLS GPKSGTPRYG SSRDAGPAKL NPRKAAGSNT PPASRRPSGL SSDSEMEKPD 180 GPAPSGHRPG TKKQGRMIAN RQSAHRSRQR KLQYVQDLEN SIKKVDEDVS RRKRRRDELL 240 EEGKKMEYEI AVKKRQLLEA ETMCAFYYKK FKENERKLHE VHHAQVPAPL KREVTDLEPL 300 IRDIPVRVLT AMANNQAGIS QVTHDRAPQG PDRLMQNFVM QATRLATPLQ PESGLREPDN 360 LHPFPLYKAI LPHQNPTRPA PVNLVNQRSQ PSDWPGNVSQ GAPSLGPLGT QPLRCHDTAG 420 ARPISTLLPT CSPNLQAAAT AHVPQQVLVK SEHQGSPVVP QGSPNMASAT YGFALLPSAQ 480 SLPEVLSMPK DATGTPLHGA ASMPAIMTHA SSPFSHIARQ GSGSYSPMVA QGSVPLAPTV 540 PQGSGILGPV VPQGSGSLSL VVPQGSGPYT PPAPQGSGPY SPMVTQSSGT PLGSMVSQGS 600 APPGPMLSQG SSPMGPSSPS APLGPQGPNI VPVSATYPGT QLDAKASGVM PTSLPHSPT*

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MSPPGGGGLP SENHNQINRL QFCQTQGTFE EHIYLEHPMS FPPSGAAPES DGRNRAGSQR  60
TVPPLPRTGL RTQRSSRSAA SGGGLATSLD LSGFSSGSGA TKDLQGLRIS SEDGGRANAG  120
ARESGLSTLS GPKSGTPRYG SSRDAGPAKL NPRKAAGSNT PPASRRPSGL SSDSEMEKPD  180
GPAPSGHRPG TKKQGRMIAN RQSAHRSRQR KLQYVQDLEN SIKKVDEDVS RRKRRRDELL  240
EEGKKMEYEI AVKKRQLLEA ETMCAFYYKK FKENERKLHE VHHAQVPAPL KREVTDLEPL  300
IRDIPVRVLT AMANNQAGIS QVTHDRAPQG PDRLMQNFVM QATRLATPLQ PESGLREPDN  360
LHPFPLYKAI LPHQNPTRPA PVNLVNQRSQ PSDWPGNVSQ GAPSLGPLGT QPLRCHDTAG  420
ARPISTLLPT CSPNLQAAAT AHVPQQVLVK SEHQGSPVVP QGSPNMASAT YGFALLPSAQ  480
SLPEVLSMPK DATGTPLHGA ASMPAIMTHA SSPFSHIARQ GSGSYSPMVA QGSVPLAPTV  540
PQGSGILGPV VPQGSGSLSL VVPQGSGPYT PPAPQGSGPY SPMVTQSSGT PLGSMVSQGS  600
APPGPMLSQG SSPMGPSSPS APLGPQGPNI VPVSATYPGT QLDAKASGVM PTSLPHSPT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	272	RRKRRRDELLEEGKKMEYEIAVKKRQLLEAETMCAFYYKKFK
2	232	236	RKRRR
3	232	273	RRKRRRDELLEEGKKMEYEIAVKKRQLLEAETMCAFYYKKFK
4	233	274	RRKRRRDELLEEGKKMEYEIAVKKRQLLEAETMCAFYYKKFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-06	bZIP family protein