PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.50_1s0059.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family CPP
Protein Properties Length: 380aa    MW: 41783.9 Da    PI: 8.7393
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.50_1s0059.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR45.61.4e-14149189342
                  TCR   3 kkgCnCkkskClkkYCeCfaagkkCsee.CkCedCkNkeek 42 
                           k+C+C++skClk+YC+Cfa+gk C+++ C C++C+N+ ++
  Bobra.50_1s0059.1.p 149 GKPCKCRHSKCLKLYCDCFAQGKLCNKDwCICDGCQNNVDH 189
                          689***********************999********9875 PP
2TCR47.53.6e-15217255240
                  TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                          +k gC+C+ks+C+kkYCeC+++g++C+ +CkCe C+N e
  Bobra.50_1s0059.1.p 217 HKVGCKCTKSHCKKKYCECYQSGVYCAATCKCEACQNVE 255
                          788**********************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    
MTHRSPLENL KQSLFEARRA KLELRNLLSP FYPERNFEET SSVEIPGPSS VPGFSDARRS  60
VRALPKEMQS QACPGSDQGR LGGPWTVSRE RSVQSPSVET AFQDRSIDDT TGLLRRGGRP  120
RNPTRGTMSE TTQQKQCTSK PPQTSQTDGK PCKCRHSKCL KLYCDCFAQG KLCNKDWCIC  180
DGCQNNVDHP DEVERARNDA LVKDVNAFQP KVGTAGHKVG CKCTKSHCKK KYCECYQSGV  240
YCAATCKCEA CQNVEGAVFR PARKAGSRGL AAASSSEGAE RQLMRSDSAY GYNTCKVNVL  300
SNKRKFDEQD TGSNPSCNQD GSQPSERVTH PLPKRERFLP GSVTPGNEQE AAVAALLGLG  360
VNVEETHHHP FRKGPHGWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20110.15e-26CPP family protein