PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.49_2s0037.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

HB-other

Protein Properties

Length: 1124aa MW: 122301 Da PI: 6.3482

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.49_2s0037.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.7	1.9e-08	97	145	8	56
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ + e+Le+l + +++p+++e eeLAk+l + ++Vk WF +R k++ Bobra.49_2s0037.1.p 97 SSIEAEQLEALWQIKQKPKQSEYEELAKQLLTDIKKVKKWFADKRKKMR 145 666789*****************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1124 aa Download sequence
MACARGTLQS FWSKKPQPRQ PVVTISKDTK RQDKVQGSKD VAPTDGIQDQ KAEDNQAYSH 60 DTKLCEVVSA ANIDSSQGPK HGEGGKKKRK RDDSFPSSIE AEQLEALWQI KQKPKQSEYE 120 ELAKQLLTDI KKVKKWFADK RKKMRTCSDQ PASEVGKPEQ SASLRKPGLL KQEALASGNH 180 EVELSQPDDD TRQIDASSMP VDRSFPTPME GIEQQTPAAG EDASCPHHNS TRANLSNFCD 240 ASGASAHLDN SNMLQPSSTS GLNSQVDDPP KQTLQALKGD MAASQQGPQK CKSGKENINE 300 QATSTAGECK ASGPDRPCVA RQADGDIPGE DFGKVNSIRD HQGQGEDIKA PLEETMGDNG 360 QSQGGGVCDD GDGQAHKRVS EMLPEHMQAP HKRARESPAD TSTKDCPVPA SNIPFVAPGN 420 TKLAQAKSAG KKKAGPPLKA SMEDCAGYLS IAREEAAALR EALLAWPLLV DLPELLVPKR 480 SEMKRAEVAG FLGGCRLPLS LLVERLWLVH THGDESSPLS KTAVRNLVLD LGCRRSFSAR 540 DGGADALDAL EDTSGERHWF WEVRDTKILP KNLRTRAVHH SKLLHKVADR LTVLLDIVKT 600 LEGTSLPTSA ALSKIADRLS KSKVDIAEVR QVSGLPCAPL SKALGVEPRI AAPLCLGDKS 660 DGEVKADPVS FLGKSAPSEA NAPLASSSDD PSPATSMSGP VAGAAASTAL VDKKDPAEVS 720 ADAARQTKEE ARLAAQQEKD RAKREKAEEK ERLKKQKEEE REKAKQMLLA EKEKARAEKA 780 VQQEVEREAK EKLKAEKKKV AGFGSAKKME KSRSLMAAMF LKTPAPSQRP SPAGATPPVP 840 SPFGSHPEPR ALSFHDLFSP APEDLRLQAP IAARTDRTTS DLIASVAGAD LREEIIQHWK 900 RLPKHRRVWG LPPSWARRHN VMERVEQLKG SGSLSGARLW RRKFIWFPAD SPRPPYYGSW 960 SKSSQDVRPR QPFGKDGIMD YDVMSDQEWE EEPEGEELSD NEIDEEEDEE GSLDGGFVVQ 1020 DGYMSEDEGI QSPDNDLDDL CAELEGSVSG GPEGKLADPA ASRQWALLEA TLEKSRRCNR 1080 PLIISRLPSV KDPQQEPGTP LDYMPGDASL LSALKIQVLP RSF*

Sequence ? help Back to Top

Protein Sequence Length: 1124 aa Download sequence

MACARGTLQS FWSKKPQPRQ PVVTISKDTK RQDKVQGSKD VAPTDGIQDQ KAEDNQAYSH  60
DTKLCEVVSA ANIDSSQGPK HGEGGKKKRK RDDSFPSSIE AEQLEALWQI KQKPKQSEYE  120
ELAKQLLTDI KKVKKWFADK RKKMRTCSDQ PASEVGKPEQ SASLRKPGLL KQEALASGNH  180
EVELSQPDDD TRQIDASSMP VDRSFPTPME GIEQQTPAAG EDASCPHHNS TRANLSNFCD  240
ASGASAHLDN SNMLQPSSTS GLNSQVDDPP KQTLQALKGD MAASQQGPQK CKSGKENINE  300
QATSTAGECK ASGPDRPCVA RQADGDIPGE DFGKVNSIRD HQGQGEDIKA PLEETMGDNG  360
QSQGGGVCDD GDGQAHKRVS EMLPEHMQAP HKRARESPAD TSTKDCPVPA SNIPFVAPGN  420
TKLAQAKSAG KKKAGPPLKA SMEDCAGYLS IAREEAAALR EALLAWPLLV DLPELLVPKR  480
SEMKRAEVAG FLGGCRLPLS LLVERLWLVH THGDESSPLS KTAVRNLVLD LGCRRSFSAR  540
DGGADALDAL EDTSGERHWF WEVRDTKILP KNLRTRAVHH SKLLHKVADR LTVLLDIVKT  600
LEGTSLPTSA ALSKIADRLS KSKVDIAEVR QVSGLPCAPL SKALGVEPRI AAPLCLGDKS  660
DGEVKADPVS FLGKSAPSEA NAPLASSSDD PSPATSMSGP VAGAAASTAL VDKKDPAEVS  720
ADAARQTKEE ARLAAQQEKD RAKREKAEEK ERLKKQKEEE REKAKQMLLA EKEKARAEKA  780
VQQEVEREAK EKLKAEKKKV AGFGSAKKME KSRSLMAAMF LKTPAPSQRP SPAGATPPVP  840
SPFGSHPEPR ALSFHDLFSP APEDLRLQAP IAARTDRTTS DLIASVAGAD LREEIIQHWK  900
RLPKHRRVWG LPPSWARRHN VMERVEQLKG SGSLSGARLW RRKFIWFPAD SPRPPYYGSW  960
SKSSQDVRPR QPFGKDGIMD YDVMSDQEWE EEPEGEELSD NEIDEEEDEE GSLDGGFVVQ  1020
DGYMSEDEGI QSPDNDLDDL CAELEGSVSG GPEGKLADPA ASRQWALLEA TLEKSRRCNR  1080
PLIISRLPSV KDPQQEPGTP LDYMPGDASL LSALKIQVLP RSF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	115	KKKRKRDDSFPSSIEAEQLEALWQIKQKPK
2	87	116	KKKRKRDDSFPSSIEAEQLEALWQIKQKPK
3	88	117	KKKRKRDDSFPSSIEAEQLEALWQIKQKPK