PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.43_1s0005.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB
Protein Properties Length: 183aa    MW: 20642.8 Da    PI: 8.7824
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.43_1s0005.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.9e-094351547
                         HHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding 15 avkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +v+ lG g W+ I++ ++ gR +kqc++rw++ 
  Bobra.43_1s0005.1.p  4 LVRDLGEGKWSCISKFFP-GRIGKQCRERWFNQ 35
                         7999**************.***********996 PP
2Myb_DNA-binding56.18.5e-1871111345
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                          +WT+eE+ +lvda++ lG++ W+ Ia+++  gRt++ +k++w+
  Bobra.43_1s0005.1.p  71 AWTEEEEVKLVDAHRALGNR-WAEIAKCIV-GRTENAVKNHWN 111
                          8*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MDRLVRDLGE GKWSCISKFF PGRIGKQCRE RWFNQLRPTA RIINLVITST VIRTKIPGEN  60
LFVCRTSGVD AWTEEEEVKL VDAHRALGNR WAEIAKCIVG RTENAVKNHW NATIRRKDSG  120
SFYVYIVGLT FEDDMCSHRP PPPCWCSTAN ASMTCSLVVG FNGFENMHVM HVAPLPHGPP  180
RN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.12e-30MYB family protein