PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.357_2s0025.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family NF-YB
Protein Properties Length: 153aa    MW: 17384.5 Da    PI: 6.3579
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.357_2s0025.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.92.5e-5717112196
                 NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 
                           vreqdrflPian+srimkk+lP naki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa++tlGfedyveplk+yl+k
  Bobra.357_2s0025.1.p  17 VREQDRFLPIANISRIMKKALPPNAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKLYLHK 105
                           69*************************************************************************************** PP

                 NF-YB  90 yrelege 96 
                           yre e++
  Bobra.357_2s0025.1.p 106 YREGEKA 112
                           ***9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MSAAPDDGRD DGDERAVREQ DRFLPIANIS RIMKKALPPN AKIAKDAKET VQECVSEFIS  60
FITSEASDKC QREKRKTING DDLLWAMSTL GFEDYVEPLK LYLHKYREGE KANLQKQAAA  120
GMGSSNDVRK DGREDLPYMQ PNMYMQHHQQ HH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.16e-64NF-YB family protein