PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.182_3s0062.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family SBP
Protein Properties Length: 275aa    MW: 29666.2 Da    PI: 9.2343
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.182_3s0062.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP92.15.9e-29137214178
                           --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
                   SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                           +Cqv++C   l+ +  yh+r ++Cevh k p+ + +g++qrfCqqC+r hel  f+ +krsCr +L+khn+rrr++++
  Bobra.182_3s0062.1.p 137 VCQVKDCGRSLAPLTMYHQRSRICEVHLKLPSFMRAGKQQRFCQQCGRCHELAAFEGTKRSCRVQLNKHNARRRRQKE 214
                           6*************************************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MCLLGGGSLP GVHQPWAMSD WNWDPFSMTA TTRTDGPDAR ASKRANIGAL AQGSIRMSGV  60
TRSNTGTGSQ SNMLDSKGQV WKELLSGDFN KNHSASERAS GRSDPSLPDE DSQERTGLEE  120
SQELSAGRLL GSLSNMVCQV KDCGRSLAPL TMYHQRSRIC EVHLKLPSFM RAGKQQRFCQ  180
QCGRCHELAA FEGTKRSCRV QLNKHNARRR RQKEKQERVK EGTRHGGRSG GGHVLPDSVP  240
LGLESPLGTG AASSEGMGAH SILNSTTESA EAVF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208216RRRRQKEKQ
2226232GGRSGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.11e-17SBP family protein