PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.168_1s0055.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family MYB_related
Protein Properties Length: 347aa    MW: 38666.7 Da    PI: 8.8326
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.168_1s0055.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-141357147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                          r +W++ E+e++ ++ k++G + Wk I +++g  R+  q++s+ qky
  Bobra.168_1s0055.1.p 13 REKWSESEHERFTEGLKLFGRD-WKQIVAHVG-SRSVAQVRSHAQKY 57
                          789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MMTRKPYRIT KPREKWSESE HERFTEGLKL FGRDWKQIVA HVGSRSVAQV RSHAQKYFLK  60
LEKSGNALEV PPPRPKKAAL PRLLPGASKE GSPSSLCGGT SRQPKSHQAP LPRQGFVRVF  120
LPVNMSISPL RNRSSHELLK FLRYRQGRQC QHPPQLWQGP PPSSGQASED CQRISTSPSF  180
TRSNSTPLPI HHHHPSSASM DSIHAYPTCP RAPPFALTAP PAMPTFQVGG PQELYAENQG  240
NSFYPREITD QALPWFAGIP SHMGQDVMPM GQFLQSFQFP GGLELWPPEG MRESSGSSHC  300
SEEYIPCLPQ QQYNQCYGND LQAGLGGANP LDHEYDVELW LNEVVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01520.13e-24MYB_related family protein