PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.160_2s0032.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family CAMTA
Protein Properties Length: 249aa    MW: 28063.1 Da    PI: 10.126
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.160_2s0032.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1148.41.8e-46491654117
                  CG-1   4 ekkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs.. 88 
                            ++ wl+n e++++L ++++++++   e++trp+ gsl+L++rk vryfrkDG++w+kk dgktvrE+hekLKvg  e+l+cyY+h+  
  Bobra.160_2s0032.1.p  49 ARSTWLQNVEVVDLLRHHKEYNFHVntEPPTRPPGGSLFLFDRKTVRYFRKDGHNWRKKADGKTVRETHEKLKVGKKEMLNCYYSHAeh 137
                           4899************999998877679***********************************************************33 PP

                  CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                           ++  ++qrrcywlLe + +++vlvhyl v
  Bobra.160_2s0032.1.p 138 TDSLQLQRRCYWLLEGD-DDVVLVHYLMV 165
                           3456789**********.********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MAESPSKLGS AEGNMAQRSP PVPGQAQAIL SEPKENMGPK AALEVVARAR STWLQNVEVV  60
DLLRHHKEYN FHVNTEPPTR PPGGSLFLFD RKTVRYFRKD GHNWRKKADG KTVRETHEKL  120
KVGKKEMLNC YYSHAEHTDS LQLQRRCYWL LEGDDDVVLV HYLMVDLHQN RPRPAPTPPV  180
SSPCRDLLQN PGKSGSGQQG RSLLGLGTWR TQACKGLSSI SVWLTSWVDL GRFPSRMLVK  240
QKCMQERG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.22e-45CAMTA family protein