PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0386s0074.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

Dof

Protein Properties

Length: 654aa MW: 68305 Da PI: 9.9967

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0386s0074.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.8	3.1e-35	126	181	6	61
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s +tkfCyynny+++qPryfCkaC+ryWt+GG+lrnvP+G+grrk+k++ Bobra.0386s0074.1.p 126 PNCPRCCSYDTKFCYYNNYNVKQPRYFCKACQRYWTAGGTLRNVPIGAGRRKHKNH 181 68**************************************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MTPNLRQSSP QAVKKRSFQE KRDSTEEQGR ASIPASGSSG DRGVSGGASA EGQATSGESN 60 NEEPQAQQQA SEPAHVQAHG AEPQGHCPSR TSSGAHTPTL SKKRKASSAP VKSGNRPKLP 120 RPDGVPNCPR CCSYDTKFCY YNNYNVKQPR YFCKACQRYW TAGGTLRNVP IGAGRRKHKN 180 HAARQQTRLA PQSSAQTHVP SGSLEGLRMA ELLQHQHMPA ALPAGLHPGL LPGVGVGVGM 240 GLTTLPHLGT ATLGGTVFVP EAPLTAAAHT LAGHHISRPG STSLGRSSDT LVRFSNGLNS 300 KSVPSKTGNG NSNGSQPSSE RDNKTSDEGS VHMRRHASSR LNVRTAKASG EHANGEISGQ 360 GPHAHQKGSG SDPLRAMTNS PSPPAAPSNG TLSHDSGVLL PNGYPGLAAF SGPQNGDAGF 420 AARDGAPAAW HLGASPHPTA FLANLQATNL GFTPSYSLTH WPYGVYQPPF SNPQYMAAYA 480 RASMGNGSWP IEGSHGVVQP AAMSQTAVVP PGVGVGMGKD GTPMLAAGHT NGSQIFPGWP 540 GAGMAFNGWS QEPTAASTWQ QNWACLAATA DARGPAPAAH PHKRIWDAHM HQLLLGQGTA 600 RTLQDLVNEA QKAILCRQCC VDFIQPEKAP GGFSNFTSSW MSLLRSSGLL QSL*

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MTPNLRQSSP QAVKKRSFQE KRDSTEEQGR ASIPASGSSG DRGVSGGASA EGQATSGESN  60
NEEPQAQQQA SEPAHVQAHG AEPQGHCPSR TSSGAHTPTL SKKRKASSAP VKSGNRPKLP  120
RPDGVPNCPR CCSYDTKFCY YNNYNVKQPR YFCKACQRYW TAGGTLRNVP IGAGRRKHKN  180
HAARQQTRLA PQSSAQTHVP SGSLEGLRMA ELLQHQHMPA ALPAGLHPGL LPGVGVGVGM  240
GLTTLPHLGT ATLGGTVFVP EAPLTAAAHT LAGHHISRPG STSLGRSSDT LVRFSNGLNS  300
KSVPSKTGNG NSNGSQPSSE RDNKTSDEGS VHMRRHASSR LNVRTAKASG EHANGEISGQ  360
GPHAHQKGSG SDPLRAMTNS PSPPAAPSNG TLSHDSGVLL PNGYPGLAAF SGPQNGDAGF  420
AARDGAPAAW HLGASPHPTA FLANLQATNL GFTPSYSLTH WPYGVYQPPF SNPQYMAAYA  480
RASMGNGSWP IEGSHGVVQP AAMSQTAVVP PGVGVGMGKD GTPMLAAGHT NGSQIFPGWP  540
GAGMAFNGWS QEPTAASTWQ QNWACLAATA DARGPAPAAH PHKRIWDAHM HQLLLGQGTA  600
RTLQDLVNEA QKAILCRQCC VDFIQPEKAP GGFSNFTSSW MSLLRSSGLL QSL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	5e-30	Dof family protein