PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bobra.0386s0074.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
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Family | Dof | ||||||||
Protein Properties | Length: 654aa MW: 68305 Da PI: 9.9967 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 111.8 | 3.1e-35 | 126 | 181 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s +tkfCyynny+++qPryfCkaC+ryWt+GG+lrnvP+G+grrk+k++ Bobra.0386s0074.1.p 126 PNCPRCCSYDTKFCYYNNYNVKQPRYFCKACQRYWTAGGTLRNVPIGAGRRKHKNH 181 68**************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 654 aa Download sequence |
MTPNLRQSSP QAVKKRSFQE KRDSTEEQGR ASIPASGSSG DRGVSGGASA EGQATSGESN 60 NEEPQAQQQA SEPAHVQAHG AEPQGHCPSR TSSGAHTPTL SKKRKASSAP VKSGNRPKLP 120 RPDGVPNCPR CCSYDTKFCY YNNYNVKQPR YFCKACQRYW TAGGTLRNVP IGAGRRKHKN 180 HAARQQTRLA PQSSAQTHVP SGSLEGLRMA ELLQHQHMPA ALPAGLHPGL LPGVGVGVGM 240 GLTTLPHLGT ATLGGTVFVP EAPLTAAAHT LAGHHISRPG STSLGRSSDT LVRFSNGLNS 300 KSVPSKTGNG NSNGSQPSSE RDNKTSDEGS VHMRRHASSR LNVRTAKASG EHANGEISGQ 360 GPHAHQKGSG SDPLRAMTNS PSPPAAPSNG TLSHDSGVLL PNGYPGLAAF SGPQNGDAGF 420 AARDGAPAAW HLGASPHPTA FLANLQATNL GFTPSYSLTH WPYGVYQPPF SNPQYMAAYA 480 RASMGNGSWP IEGSHGVVQP AAMSQTAVVP PGVGVGMGKD GTPMLAAGHT NGSQIFPGWP 540 GAGMAFNGWS QEPTAASTWQ QNWACLAATA DARGPAPAAH PHKRIWDAHM HQLLLGQGTA 600 RTLQDLVNEA QKAILCRQCC VDFIQPEKAP GGFSNFTSSW MSLLRSSGLL QSL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47500.1 | 5e-30 | Dof family protein |