PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0385s0002.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C3H
Protein Properties Length: 299aa    MW: 33127.5 Da    PI: 9.5644
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0385s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH322e-1097123127
                          --S---SGGGGTS--TTTTT-SS-SSS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                          yktelCrf+   G C +Gd+C+FaHg+
  Bobra.0385s0002.1.p  97 YKTELCRFHGTIGGCGRGDKCTFAHGE 123
                          9************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MVLVHSSSLA PLRHARAPLL TLTSDPSVDD LHSCFYLAQL EGRGPITFYS VASCVNVPGR  60
PGARCWPHLP QNSRPNSHVY TYSKLHYMLA QDITPRYKTE LCRFHGTIGG CGRGDKCTFA  120
HGERELRSPS ERSARHTSTD SSPGSLHATG SGVLYRGSPV QACPELKTCS NILSPAQNVM  180
RQKVHAQLSS GTASAAHNWL RARRDEHASA KFAKCNKNVT LFQEIINCVY ADVEGESRFQ  240
CLINFEETTW RFKTEFCRNY RTRPRLQGNR SKYAHGSREL RSLSGGLPTV AYPMGLTS*