PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bobra.0284s0009.1.p
Organism
Botryococcus braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus
Family C2H2
Protein Properties Length: 445aa    MW: 45149.7 Da    PI: 8.2116
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bobra.0284s0009.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.1e-051637323
                         ETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
                         C +C+++F++  +L +H+r  H
  Bobra.0284s0009.1.p 16 CYYCDRVFNDEATLIQHQRAkH 37
                         99*****************888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MVRKRKKAEE TLKPWCYYCD RVFNDEATLI QHQRAKHFKC PTCAKKLTTA QGLSVHCMQV  60
HKKTLDGVPF AKPGKNDPSL EIFGMSGVPA GIQPGVALED ESEVDAAQSS IGPAGSLTAP  120
VASIPVPAPV PAYVPPIVPP PGLYPPTAAY NPPPYPGYAY APPPFPGAPA VPGYPSLPPR  180
PLVPLPVHPG GPPGMPMPGG PLPMGPPISV PPSFAPGVPP AARPPLFPIG VPGGVPGIQG  240
APVPAAAPAQ APLFPIGQAP PATAPGQQGP PGMYSEAPPG YAAPPGQPGQ SRPPLQALPG  300
QVGPPPLFPI QAAGLGAPAQ PAPHAQSQGG GPFVPGAALD NHSGEGVRNH NVAPASVPDG  360
DLVWTDPDVS QEEVRSLSPK YKAFVSQGPD SGIPAGPAAP PRQPALGLPS PQVNGANLGG  420
NHGTPFPHIP QGQAPQAFYN QPLR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
137RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30970.19e-31C2H2 family protein