PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0237s0011.1.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

HB-other

Protein Properties

Length: 519aa MW: 56845 Da PI: 8.729

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0237s0011.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.1e-09	23	68	7	52
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +t+eql+ Le F+ +++p ++++ +L l+L+ + + WF +R Bobra.0237s0011.1.p 23 LTPEQLRSLEMTFNTTPTPEEHKICQLHFALKLPVNMIEEWFERKR 68 69****************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MSQVKVLVPF AWSDMTAMPG VELTPEQLRS LEMTFNTTPT PEEHKICQLH FALKLPVNMI 60 EEWFERKRRE TSTYPSSRAF HVLNNTGLPL SISSPSSSIP SGETAVHSRR PCPPASQRDN 120 ACLAKKLTTE TPFSESSYLS TIRGCFSKGA SDPTRQAVLS QSQQTRFMPA TTSSPVASPA 180 SCLNPNQRLA PSQPLLVQHK DLPTARTHPA PNYRHTNPPQ STTLEAGAQL NDLISLGSAP 240 PILHSGQKRK KTYLAEVHDS TSRDLVSNPF DGSAGSAYHA SPRDQQMGAV LGQYMREARL 300 PVNADVPVMM HDPLPGSRSV TGDSCVQSSL LTQGLPSLPN SHQPPAQTPH VDSFGCLDDM 360 VDSDAGRFGE PDLALLSDLL GLKTVITSGG ETMYLFEQLT FLDSNIPEDT ASPGKKRRTR 420 HQHFWRNSDK FPRQERRYAQ SSEVNSASGN GTRVNVKLDI AAEERTNQWT VVLTKSGTLN 480 FINRKIGPLG VRLFRAALNC RRGISQNRVA WSFPGPDD*

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MSQVKVLVPF AWSDMTAMPG VELTPEQLRS LEMTFNTTPT PEEHKICQLH FALKLPVNMI  60
EEWFERKRRE TSTYPSSRAF HVLNNTGLPL SISSPSSSIP SGETAVHSRR PCPPASQRDN  120
ACLAKKLTTE TPFSESSYLS TIRGCFSKGA SDPTRQAVLS QSQQTRFMPA TTSSPVASPA  180
SCLNPNQRLA PSQPLLVQHK DLPTARTHPA PNYRHTNPPQ STTLEAGAQL NDLISLGSAP  240
PILHSGQKRK KTYLAEVHDS TSRDLVSNPF DGSAGSAYHA SPRDQQMGAV LGQYMREARL  300
PVNADVPVMM HDPLPGSRSV TGDSCVQSSL LTQGLPSLPN SHQPPAQTPH VDSFGCLDDM  360
VDSDAGRFGE PDLALLSDLL GLKTVITSGG ETMYLFEQLT FLDSNIPEDT ASPGKKRRTR  420
HQHFWRNSDK FPRQERRYAQ SSEVNSASGN GTRVNVKLDI AAEERTNQWT VVLTKSGTLN  480
FINRKIGPLG VRLFRAALNC RRGISQNRVA WSFPGPDD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	70	ERKRRE