PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bobra.0201s0013.3.p

Organism

Botryococcus braunii

Taxonomic ID

38881

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Elliptochloris clade; Botryococcus

Family

CAMTA

Protein Properties

Length: 1374aa MW: 150486 Da PI: 6.8888

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bobra.0201s0013.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	153.3	5.4e-48	33	149	2	117
CG-1 2 lkekkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +k k+ wlkn e++++L+n++++++ +++++p+ gs++L++rk vr+frkDG++w+kk dgktvrE+hekLKvg+ ++l+cyYah++ Bobra.0201s0013.3.p 33 TKGKTSWLKNPEVCELLMNHASYNMPIsrDAPNQPPGGSIFLFDRKAVRFFRKDGHNWRKKADGKTVRETHEKLKVGNQDMLNCYYAHAN 122 56699****************97665699******************************************************* PP CG-1 90 enptfqrrcywlLeeelekivlvhylev 117 ++ +qrrcywlL +e ++ivlvhyl+ Bobra.0201s0013.3.p 123 QDDGLQRRCYWLLSSE-DDIVLVHYLNI 149 ***********9.******985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1374 aa Download sequence
MDTRNKQAPS GGAAVPIDPS DPNLLPKVRE ILTKGKTSWL KNPEVCELLM NHASYNMPIS 60 RDAPNQPPGG SIFLFDRKAV RFFRKDGHNW RKKADGKTVR ETHEKLKVGN QDMLNCYYAH 120 ANQDDGLQRR CYWLLSSEDD IVLVHYLNIE KDKSGVRKNE NINDFERTRS RTSNFSASSS 180 GNFGPGLAGL IPGLTGLPGD ASQSFLPLTA SLQGGIGSLF DLYSQTEENA VRRELQQGSS 240 YVDNLLPNAW GTIRNGGGAG LDPGLPDWSS HPSMLTNDLN DQAHLVEHAG SLRLIELGFP 300 EDPWSSDLAN AMRTPSLEMR IQSSELRQNL RARQQSMERN ALMGIPHNNL FSGGTNSRAA 360 LGLGNLNLGA PNMFGNVPPR PGAQGRGPGQ ASNSLQMLQQ QHFQQQLDMQ LAQAMNTAAV 420 QQQHQQDQQL LNSAADLNAV YVRQQQQQQQ QQQQQHQGRM GINQWANDLV AGTLPIGHSD 480 RLGDLSGLPA HVLMGHGPLA PQPLTDQNQG FPRALSEGHH PIQMMAPPPA EQAPQQNLLV 540 EMNEPTQQMW RGNNTFRTGQ VLAMERQLND IDRQTMEALM TSRSGKLNSQ ASTSHVIDSK 600 VKTLEDKLER LEAGSQMIFS GALPSQPSES GGQRSVTMRT PSAGGIEVSQ QMSPGDSTES 660 RREDERQTSQ RPPSSLRNGL SASADSIPFE LVDFTPDWDF TVGGAKMILT FKTSDVSIAE 720 RQLVVMFDED QVPGTVICQG AVRCHVPPHE VGTVKLCVAT EDGVPLCRPQ PFTYRLPADA 780 PRVADAMALV TQPDRELQLH LVNMLLAVAP SHSDGASDTR TSGHSISAEG SRQHRTPNPG 840 TPSPSEDEPV VMDGQGNLAA LDVHQLEKLL ILLLERKFKF LASLPDGRDA SLPRSKPTQS 900 RDVLSQLSPG GVGLIHFAAA LGYDWAVNIL LQGGANVQLK DAWGMTPLHW AAMRGHERTV 960 ALLIVRDASV DLLSFPTQKR SGRTAADLAS QNGHPGMAAY LAELTVMEHL EKQDKKIMSD 1020 GLSGTDEESH KPEFHRPGSA PHRRKRTRAP LGVDVPTDWG SPGCSENSPV SVDSNKGLDN 1080 GIRGNAAKVV ARVKWAVKFL HQSRGRQVAR KARLEERRQR LAQREGEALS RIGESLKVWD 1140 EMQNIAKQEL DHSEASDSLL RRFITLGERI TRLNRTFKGA LTHRDYGLAG SDTEEPEEGW 1200 RAERDRGKIA DYGSDSDVQM IRGDSLSSAR RLQQLHNSRR KNSLTGIKGM GVSDQELRAF 1260 LKGGGPSAAA NPPDVSLTEL RKQLREDSLL SSISLSPSTE LAPIPATANT DVPETSLTPD 1320 LRAVLQYVEV LLGDPGAWDE YLRMESLVEH LKAQPLPRKF LRTASNNAVI ITI*

Sequence ? help Back to Top

Protein Sequence Length: 1374 aa Download sequence

MDTRNKQAPS GGAAVPIDPS DPNLLPKVRE ILTKGKTSWL KNPEVCELLM NHASYNMPIS  60
RDAPNQPPGG SIFLFDRKAV RFFRKDGHNW RKKADGKTVR ETHEKLKVGN QDMLNCYYAH  120
ANQDDGLQRR CYWLLSSEDD IVLVHYLNIE KDKSGVRKNE NINDFERTRS RTSNFSASSS  180
GNFGPGLAGL IPGLTGLPGD ASQSFLPLTA SLQGGIGSLF DLYSQTEENA VRRELQQGSS  240
YVDNLLPNAW GTIRNGGGAG LDPGLPDWSS HPSMLTNDLN DQAHLVEHAG SLRLIELGFP  300
EDPWSSDLAN AMRTPSLEMR IQSSELRQNL RARQQSMERN ALMGIPHNNL FSGGTNSRAA  360
LGLGNLNLGA PNMFGNVPPR PGAQGRGPGQ ASNSLQMLQQ QHFQQQLDMQ LAQAMNTAAV  420
QQQHQQDQQL LNSAADLNAV YVRQQQQQQQ QQQQQHQGRM GINQWANDLV AGTLPIGHSD  480
RLGDLSGLPA HVLMGHGPLA PQPLTDQNQG FPRALSEGHH PIQMMAPPPA EQAPQQNLLV  540
EMNEPTQQMW RGNNTFRTGQ VLAMERQLND IDRQTMEALM TSRSGKLNSQ ASTSHVIDSK  600
VKTLEDKLER LEAGSQMIFS GALPSQPSES GGQRSVTMRT PSAGGIEVSQ QMSPGDSTES  660
RREDERQTSQ RPPSSLRNGL SASADSIPFE LVDFTPDWDF TVGGAKMILT FKTSDVSIAE  720
RQLVVMFDED QVPGTVICQG AVRCHVPPHE VGTVKLCVAT EDGVPLCRPQ PFTYRLPADA  780
PRVADAMALV TQPDRELQLH LVNMLLAVAP SHSDGASDTR TSGHSISAEG SRQHRTPNPG  840
TPSPSEDEPV VMDGQGNLAA LDVHQLEKLL ILLLERKFKF LASLPDGRDA SLPRSKPTQS  900
RDVLSQLSPG GVGLIHFAAA LGYDWAVNIL LQGGANVQLK DAWGMTPLHW AAMRGHERTV  960
ALLIVRDASV DLLSFPTQKR SGRTAADLAS QNGHPGMAAY LAELTVMEHL EKQDKKIMSD  1020
GLSGTDEESH KPEFHRPGSA PHRRKRTRAP LGVDVPTDWG SPGCSENSPV SVDSNKGLDN  1080
GIRGNAAKVV ARVKWAVKFL HQSRGRQVAR KARLEERRQR LAQREGEALS RIGESLKVWD  1140
EMQNIAKQEL DHSEASDSLL RRFITLGERI TRLNRTFKGA LTHRDYGLAG SDTEEPEEGW  1200
RAERDRGKIA DYGSDSDVQM IRGDSLSSAR RLQQLHNSRR KNSLTGIKGM GVSDQELRAF  1260
LKGGGPSAAA NPPDVSLTEL RKQLREDSLL SSISLSPSTE LAPIPATANT DVPETSLTPD  1320
LRAVLQYVEV LLGDPGAWDE YLRMESLVEH LKAQPLPRKF LRTASNNAVI ITI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	6e-43	CAMTA family protein